Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00941 TTTCATTACACTCTCTCTTTCACGCCTAAATTACTCTTATGCAGTTTTGATGTTTGTCCCAGCACCTCCATACATATTTTAAACCCCTAAATTACTCTTATGCACCCCAAACCCTACGGTGGAAACTCTCGACTGCATCCTTATCCCCTCTCCATCTGCTTGCATTTTGTTGTTTGGGTAACTTAATCCAAACTCCTATGCCGCATTCTTCCTTACGTGTAAGTTGTAAGTTGTAACCTGTAATCTACACTTATCAAACCAATACATCACTGGGCGTGGGAGCTTTGGTAACTTCCCAGAAGAGAATATGGGGACTTTGTAGAGGGACAAATGGGGAAAAGAAAATAGAAAAGATTGAAAGGCTTGGATTGAAAAGTTGAAATATCTAACGGTTGAAAGAGGGTCTTCCACTGTGTAGACCCAATCTTTTTTGTGTCCTTGGTTGAAGAAACAGAAAGAGCGTGTGTGGATGGCGGTGAGATTGGCTCCCCCCCATTACTGGCGGCCGCTTCTGTTTTCCCACAACGCCAAACACGGCCTAACTAACTTCTCCTCCATCAGCGCCCTAGCTCGAACGCCGAAATCACGAGACGAAGGAGCAACGACCGTTAAGCTTTCGAGCAAAGCGAGAAGAAAAGCCTTCTTCGAATCCCCAGAAGGAGTCTTACTGCGCAAGCTCAACGAGTGCTCAAAGGACGGAGATGTCGTTCAAGCTCTTCGCCACTACGACGAGGCTCGAAAATTGGGGGTTCTTCTCAACCTCGATCACTATAACAAGTTGCTCTACCTTTGTTCCGTTGAAAATGGTGGTGTTCCCCATGTGGGTCTCAAAAGGGGCTTTGAGATTTTTCAGCACATGTTGAGTGACCGAGTTCAGCCCAATGAAGCCACGTTTACCAATGCCGCTAGGCTTGCTGCTGCCAAGGAAGATCCTGATATGGCTTTTGAACTGCTCAAGCAGATGAAGAATGTTGCCATTGCTCCCAAACTCAGATCTTACGAGCCTGCTTTGTTTGGATTTTGCAATAGGGGTGATGCTGAGAAAGCTTATCTGGTTGATGCTGACATGGTTCAGTCTGGTATTCTGGCTGAAGAGCCCGAGCTTTGTGCTCTTTTGCAGGTCAGTGTCAATGCCGAGAAGGAAGATAAGGTGTATGAGATTTTGCACCGGTTGCGCGCCACTGTGAGGCAGCTGTCTCAATCAACTTTGCAGATAGTTGAGGACTGGTTTAACTCTGAATATGCTGTCAAAATTGGGAAGGAGAAGTGGGATGTTTGCAAGGTGAGGGAAGGGATTGTGAAGGGAGGTGGAGGATGGCATGGACAAGGGTGGCTTGGGAGTGGGCAATGGAAGGTGGCGAAGACTCAGGTCAATGAGGATGGTGTGTGTCTCTCCTGTGGCCAGAAGCTTGTTAGCATTGATATTGATCCAAAAGAGACTGACAATTTTGCTGCCTCGTTATCTAAATTAGCTTGCCAAAAAGAAGTTAAGGAAAACTTTTTTCATTTTCAGAAGTGGCTTGAACGGCATGGCCCGTTTGATGCTGTTGTAGATGGTGCCAATGTAGGCCTTGCCAACGGGCACATTTTCAGCTTTTCACAGCTTAACACCGTCGTCGAGCAATTACGTCAAATAAGCCCTTCGAAGAGATTGCCACTTATAATTTTGCATATAAGTCGGGTACATGGTGGTCCAGCTCAGAATCCAAAAAACAGGAAACTTATAGAAAACTGGAAAAAAAATGGTGCTCTTTATACTACACCTCAAGGATCAAATGATGACTGGTATTGGTTATATGCTGCTGTTAGTTGTAAATGCTTACTGTTAACAAATGATGAGATGAGGGACCACTTGTTCCAACTACTGGGTTCTAGTTTTTTCCCTAGATGGAAGGAAAAGCACCAGGTTCGAACATCAGCCTCGAATTGTGGACGCTCCCTAATTATGCCTCCCCCTTATTCAATAGTTATTCAGGAATCTGCCAATGGTAGTTGGCACGTGCCAACTGTAACTAGTGATGATAATGAGATCCCAAGGAAATGGTTGTGTGCCACAAGATCCAGAAAAAATTCATTACATAAGCTATGGGCATCGTCCTCCTCCTCTGATTGTGCTTGAGGGAGGCATATTCATCTTGGTTTGTTTTCAGTATCATCCGAGTTTTTTTTCATATTCAGTTGCAGTTCCTAGCAGCTTTGATGAATGGAAGGCATAAAATATGGTGTTGCTACCATTTCCCTGTCTTTTTGGAGTAATTTATATTTTTTGTAGCTTGATTGTATTTCTTTAGCTCCTGGCTACCCAGAAAAGAAGAAAGCTTCTCCTTCCTTTTTGGAATATCTTTAAATTTTCCTTAATAGCTGATATATGCTGCCAGTATTCAGAGATAATGCTTAAAAGGCAAATGTAAGCAGTGTATACAGATGGCTTTCTGGAGTATCTTATTGGCGAAGCTAATTTGTCCCATGTATTTTTTACAAGAGCCTTAGATCAAGTTGCACTTAGTTATTTTAGGAACTGATTGATTCCAGGATCAAAACTGAGTTCACTTTACCTTTACCTTCACTTCAGTGTGCCTTTGTATACCTCCTCCTTTGTAACAAAATAGGATAGCATTGCTGCGCTAGCATACTTTACCTTTACCTTCACTTCAGTGTGCCTTTGTATACCTCCTCCTTTGTAACAAAATAGGATAGCATTGCTGCGCTAGCATACTTTTCTTGAAAATAAGCAGGTAGATTTGATGGTAGTAGTTACTCATAATTATTTGGGCCATTGAGTTCAAGGAATAAATGTATAGACCGGATCTATTCAAAATTTTTGGCCCCTTCAATTTGTACATTTGATGAGCATAATACATGAGGC 2866 0.4288 MAVRLAPPHYWRPLLFSHNAKHGLTNFSSISALARTPKSRDEGATTVKLSSKARRKAFFESPEGVLLRKLNECSKDGDVVQALRHYDEARKLGVLLNLDHYNKLLYLCSVENGGVPHVGLKRGFEIFQHMLSDRVQPNEATFTNAARLAAAKEDPDMAFELLKQMKNVAIAPKLRSYEPALFGFCNRGDAEKAYLVDADMVQSGILAEEPELCALLQVSVNAEKEDKVYEILHRLRATVRQLSQSTLQIVEDWFNSEYAVKIGKEKWDVCKVREGIVKGGGGWHGQGWLGSGQWKVAKTQVNEDGVCLSCGQKLVSIDIDPKETDNFAASLSKLACQKEVKENFFHFQKWLERHGPFDAVVDGANVGLANGHIFSFSQLNTVVEQLRQISPSKRLPLIILHISRVHGGPAQNPKNRKLIENWKKNGALYTTPQGSNDDWYWLYAAVSCKCLLLTNDEMRDHLFQLLGSSFFPRWKEKHQVRTSASNCGRSLIMPPPYSIVIQESANGSWHVPTVTSDDNEIPRKWLCATRSRKNSLHKLWASSSSSDCA 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00941 549 Gene3D - 319 493 - -
Pste8g00941 549 Gene3D Tetratricopeptide repeat domain 62 530 IPR011990 GO:0005515
Pste8g00941 549 Pfam Protein-only RNase P 301 527 IPR031595 -
Pste8g00941 549 CDD PIN_PRORP-Zc3h12a-like 359 481 - -
Pste8g00941 549 PANTHER UNCHARACTERIZED 38 531 - -
Pste8g00941 549 FunFam Proteinaceous RNase P 2 319 493 - -
Pste8g00941 549 Pfam Pentacotripeptide-repeat region of PRORP 54 259 IPR033443 -
Pste8g00941 549 FunFam Proteinaceous RNase P 1, chloroplastic/mitochondrial 63 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00941 Pste-Chr8 4888811 4894267 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00941 70 242 Miscellaneous Gene Families AT4G11690 24.277 1.37e-09 58.9