Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00940 ATGAACAATACCCTGTTCCTCCAAAATGCTAACGCAATCCACTTCAATTTTCAGAAGCACCGTTCCGTACCCAGAGTCTCAGGCAAAGACCGTTACGGAGGCATCGAAATCAAATGCTGCAGCATCGAAATCGACATGGTGAAGAACACCCAAGGCGTTTACGCCCCAAAAAGCAACAAGGTTGTCGTCCTATGGGACCTCGACAACAAGCCCCCGCGAGGCCCCCCATACGACGCTGCCGTTTCGCTCAAAACCCTCGCCACTCGCTTCGGCGAGCTCGTCGACTTCTCCGCCTACGCCAACCGCCACGCCTTCGTCCACCTCCCCCAGTGGGTCCTACACGAGCGCCGCGAACGCAGAAACCTCGACATCCTCGAACGCAAGGGCATCGTCACCCCCTCCGACCCCTACACGTGCGGCGTGTGCGGCCGCAAGTGCAAGACCCACCTCGACCTCAAGAAGCACTTCAAACAGCTCCACCAGCGCGAGCGCCAGAAGAAGCTTAACCGTTTGCAGTCCCTCAAGGGCAATAAGCGCCACCGTTTCAAGGAACGCTTTTTGCGCCGCGATCATAAGTATGACGAGGCCGCCCGGACTCTTCTTGTCCCCAAGGTCGGCTACGGCCTCGCCGCGGAGCTCCGGCGTGCTGGGGTGTTTGTTAAAACTGTCGAGGACAAGCCCCAGGCCGCCGATTGGGCTTTGAAGAGGCAGATGGTTCATTCCATGTGTAGAGGCATTGATTGGCTGTTTTTGGTTTCCGATGATTCCGATTTTTCTGACATGTTGAGGAGGGCCAGGGAGGCCCATTTGGGGACCGTCGTTGTCGGAGATTCGGATAGGGCCCTTGGACGGCACGCCGATTTGTGGGTGTCTTGGAGTGCTGTGGAGAATGGGCATCTGGCTGCTGATTTCGTGCCAAAGAGAAGTGAGAGGACAACAAGAGAACATGACCATGTTGTATTTTTAGATGAGGACGAGGAATTGGGCCAAGAGTTTAGTTTGTATTATAGTGAAGATGACGGTGTGGATGTGGAGGACTATTATGATGATGATGATGATGAAGAAGAAGAGAAAGATGGCTTTTATATTCTTTGA 1095 0.5416 MNNTLFLQNANAIHFNFQKHRSVPRVSGKDRYGGIEIKCCSIEIDMVKNTQGVYAPKSNKVVVLWDLDNKPPRGPPYDAAVSLKTLATRFGELVDFSAYANRHAFVHLPQWVLHERRERRNLDILERKGIVTPSDPYTCGVCGRKCKTHLDLKKHFKQLHQRERQKKLNRLQSLKGNKRHRFKERFLRRDHKYDEAARTLLVPKVGYGLAAELRRAGVFVKTVEDKPQAADWALKRQMVHSMCRGIDWLFLVSDDSDFSDMLRRAREAHLGTVVVGDSDRALGRHADLWVSWSAVENGHLAADFVPKRSERTTREHDHVVFLDEDEELGQEFSLYYSEDDGVDVEDYYDDDDDEEEEKDGFYIL 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00940 364 CDD PIN_LabA-like 147 277 - -
Pste8g00940 364 ProSitePatterns Zinc finger C2H2 type domain signature. 139 160 IPR013087 -
Pste8g00940 364 PANTHER C2H2-TYPE DOMAIN-CONTAINING PROTEIN 44 357 - -
Pste8g00940 364 ProSiteProfiles Zinc finger C2H2 type domain profile. 137 165 IPR013087 -
Pste8g00940 364 Gene3D - 54 294 - -
Pste8g00940 364 Coils Coil 157 177 - -
Pste8g00940 364 MobiDBLite consensus disorder prediction 338 364 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00940 39 344 C2H2 Transcription Factor Family AT5G52010 68.404 3.24e-153 435
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pste8g00940 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00940 8 4885422 4886516 Pste8g00940 8 4885422 4886516 ECH