Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00925 ATGTCACCACATCATGTTAACATAGACACACAAAATATCAAAAGTAGTAGTGGCCACAGGACCAAAGGTGGTGGTGGCTCACCCAAAGGTTGCCACAACAACACCCAATTGGACACAAACACAACACCATGTCAAAAATCAACAACTATTCAAGCAGTTCCAGCTGCACCTCCTCTTGTATTTGCAGACCAAAGGCTTCAAGTAGTGTATCCAATAATCCAGAAATTCAAGTCCACCATCACCTCTGATCCACTAGGAGTAACCAAAACTTGGGTAGGAACAGATATATGCAGCTACAAAGGCTTCTACTGTGACACCCCTCCAGACAACAGTTCTGCCACTGCTGTAGCCTCTATTGATTTCAATGGTTTTCAACTAGCCGCTTCCACCCTTGATGGCTTCATTGACAGCCTTCCAGATATTGCTCTCTTTCATGCAAATTCCAACAACTTTGGTGGCACAATCTCACCCCAAATAGCCAAGCTACCTTACCTCTATGAGCTTGATGTGAGCAACAACCAATTATCAGGTCCATTTCCCACTGCTGTTCTAGGCATGAACACTTTAACATTCTTGGATTTAAGGTTTAATTTCTTCTCTGGGGCAGTGCCACCACAAGTATTCACACAAAACCTCCAAGTCCTTTTCATAAACAACAATATCTTCACTCAAGGGTTACCTGATAATTTAGGCTCCACTCATATTCTCTTACTCACCTTAGCTAACAACAAATTCATGGGCCCAATTCCAAGAAGCCTTCCGATGGCCTTGGCCACTCTAAGTGAAGTGTTGTTACTTAACAACCAGTTCATTGGTTGTTTACCTTATGAGATTGGTTTTCTAGAAGAGGCCACTGTGTTTGATGCTGGGAACAACCAATTGACAGGTCCTTTGCCTTTATCTTTGAGTTGTCTTGAGAAGGTGGAGGTGCTCAATTTAGGTGGTAATCTATTATATGGCATGGTGCCAGAAGTGGTGTGTGCAGGGTTAGTGAATTTGGTCAACTTTTCATTATCAGATAACTATTTCACACTTGTGGGGCCACTGTGTAGGATGCTGATTCAAAGAGGGGTTCTTGATGTTAGGAGCAATTGTATTCCTGGTCTTCCGTTTCAGAGATCAGTGATGGAGTGTGCGGAGTTCTTTGCAACACCAAGGATGTGTCCCTTCATGTGGTTTCATGGTCTCATCCCTTGTAAGCTTCCTTTTCCACATTCCATTCCTTAG 1227 0.4311 MSPHHVNIDTQNIKSSSGHRTKGGGGSPKGCHNNTQLDTNTTPCQKSTTIQAVPAAPPLVFADQRLQVVYPIIQKFKSTITSDPLGVTKTWVGTDICSYKGFYCDTPPDNSSATAVASIDFNGFQLAASTLDGFIDSLPDIALFHANSNNFGGTISPQIAKLPYLYELDVSNNQLSGPFPTAVLGMNTLTFLDLRFNFFSGAVPPQVFTQNLQVLFINNNIFTQGLPDNLGSTHILLLTLANNKFMGPIPRSLPMALATLSEVLLLNNQFIGCLPYEIGFLEEATVFDAGNNQLTGPLPLSLSCLEKVEVLNLGGNLLYGMVPEVVCAGLVNLVNFSLSDNYFTLVGPLCRMLIQRGVLDVRSNCIPGLPFQRSVMECAEFFATPRMCPFMWFHGLIPCKLPFPHSIP 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00925 408 Gene3D Ribonuclease Inhibitor 260 380 IPR032675 -
Pste8g00925 408 Gene3D Ribonuclease Inhibitor 71 259 IPR032675 -
Pste8g00925 408 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 47 399 - -
Pste8g00925 408 MobiDBLite consensus disorder prediction 1 43 - -
Pste8g00925 408 SUPERFAMILY L domain-like 78 366 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00925 Pste-Chr8 4824773 4825999 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00925 51 385 Leucine-rich Repeat extension Gene Families AT3G24480 42.985 4.12e-87 271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00925 8 4824773 4825999 Pste8g00925 8 4824773 4825999 ECH