Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00914 ATGGGGCAATCTCCGTCCTCCGCCGCTATCGCTAGCCGTCGCGAGAGGGACCAAGGCCACCGCTCCGTCAACGCCTCCAAGACTAGATCCATAGCTTCGGTTTCGCCGATGGTCGGTTATTCCTCCGGCACCGGCGAAGACGAAAATGAAAACCGTCGCGGCGAGGCGGTTACCGATGGAATCGCTGACTATATCTCCGATCTTCCAAACGAGTGCTTGGCTTCGGTGTTTCAGTTTCTCAGCTCCGCCGATCGGAACCGCTGCTCCCTCGTTTGCCGGCGGTGGCTGCAGATCGAAGGACAGAGCCGCCACCGGCTTTCTCTCAACGCCGAATCGGATCTATTTCCGGCTATTCCATCGTTATTCTCTCGCTTCGATTCGGTGACGAAGCTCGCGCTGAAGTGTGACCGCAGATCCGAGAGCATAAGAGACGACGCGCTGGTGATAATCTCGCAGCGGTGCCCTAACCTCACGCGCCTCAAACTCCGCGCGTGCCGCGAGCTGACCGACGCGGGAATGGAAGCGTTCGCGAAGAACTGCAAGGGATTGAAGAAGCTCTCGTGCGGATCTTGCACGTTCGGATCCAAAGGCATGAACGCAGTACTTAACAACTGCGCCGCACTGGAGGAGCTCTCAGTAAAGCGCCTCCGCGGAATCACCGACGCGGCGGCGGCGGAGCCAATCGGCCCCGGCGTTGCTGCGGCGTCGCTGAAAACCGTTTGCCTGAAGGAGCTCTACAACGGACAGTGTTTCGGAACGCTGATTCTCGGCGCGAAGAATCTGAAAACCTTGAAGCTTTTCCGGTGCTCTGGTGATTGGGACAGGCTATTTCAATTAATGGCAGATCGAGTCACGAACATGGTTGAGGTTCATCTCGAGAGGCTTCAAATTAGCGACGTTGGATTGCAAGCAATAGCGAATTATTCGAGTCTGGAGATTTTGCATCTTGTTAAGACTCCTGAATGTTCTGATATTGGACTTGTTGCTATTGCAGATAGGTGCAAGCTTTTGCGGAAGCTTCACATTGATGGATGGAAGGCGAATCGAATTGGGGACGAAGGTTTGATAGCTGTTGCAAAAGGTTGCCCTAATTTACTTGAATTAGTGCTGATTGGGGTTAACCCTACTAAGGCCAGTTTGGAAATGTTGGCATCTAATTGCCAGAATCTTGAGCGGTTGGCTTTGTGTGGAAGTGATTCAGTTGGTGATCCTGAGATATCTTGCATTGCTGCTAAGTGCGTGGCTTTGAAGAAACTGTGTATTAAGAGTTGTCCTGTTTCGGATCAAGGGATGGAGGCATTGGCTAATGGGTGTCCCAATTTGGTGAAAGTTAAGGTTAAGAAGTGTAAGGGGGTTACCCCTGAGGGTGGGGATTGGTTGAGGAGGACAAGGGTGTCAATTGCTGTTAATTTAGATACTGGTGAGGCAGAACTTCAGGAAGCTAGTGCTAGTGATGGAGGGGCACACGAAAATGGTATAGAGTTTCCTCAAATGCCTGCCCAAATTGCAGCTGCAGCAGCGTCTGCATCAAGCAGCACGGCTCGGTCTAGTTCCTTCAAGTCGAGGTTAGGGCTTTTGTCTGGGAGGAGTTTAGTGGCTAGCACTTTGAGGAGATGGTCGGGTGGTAGCACTAGTGCACGCCATGGTTAG 1650 0.5248 MGQSPSSAAIASRRERDQGHRSVNASKTRSIASVSPMVGYSSGTGEDENENRRGEAVTDGIADYISDLPNECLASVFQFLSSADRNRCSLVCRRWLQIEGQSRHRLSLNAESDLFPAIPSLFSRFDSVTKLALKCDRRSESIRDDALVIISQRCPNLTRLKLRACRELTDAGMEAFAKNCKGLKKLSCGSCTFGSKGMNAVLNNCAALEELSVKRLRGITDAAAAEPIGPGVAAASLKTVCLKELYNGQCFGTLILGAKNLKTLKLFRCSGDWDRLFQLMADRVTNMVEVHLERLQISDVGLQAIANYSSLEILHLVKTPECSDIGLVAIADRCKLLRKLHIDGWKANRIGDEGLIAVAKGCPNLLELVLIGVNPTKASLEMLASNCQNLERLALCGSDSVGDPEISCIAAKCVALKKLCIKSCPVSDQGMEALANGCPNLVKVKVKKCKGVTPEGGDWLRRTRVSIAVNLDTGEAELQEASASDGGAHENGIEFPQMPAQIAAAAASASSSTARSSSFKSRLGLLSGRSLVASTLRRWSGGSTSARHG 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00914 549 Gene3D Ribonuclease Inhibitor 106 484 IPR032675 -
Pste8g00914 549 FunFam F-box/LRR-repeat protein 3 isoform X1 64 104 - -
Pste8g00914 549 CDD F-box_AtTIR1-like 65 103 - -
Pste8g00914 549 MobiDBLite consensus disorder prediction 1 54 - -
Pste8g00914 549 ProSiteProfiles F-box domain profile. 62 98 IPR001810 GO:0005515
Pste8g00914 549 SUPERFAMILY F-box domain 62 98 IPR036047 GO:0005515
Pste8g00914 549 Pfam Leucine Rich repeat 416 435 IPR001611 GO:0005515
Pste8g00914 549 Pfam Leucine Rich repeat 285 306 IPR001611 GO:0005515
Pste8g00914 549 Pfam Leucine Rich repeat 154 177 IPR001611 GO:0005515
Pste8g00914 549 Pfam F-box domain 65 98 IPR001810 GO:0005515
Pste8g00914 549 SMART fbox_2 68 108 IPR001810 GO:0005515
Pste8g00914 549 SUPERFAMILY RNI-like 114 472 - -
Pste8g00914 549 PANTHER UNCHARACTERIZED 66 475 - -
Pste8g00914 549 FunFam F-box protein SKIP2 100 481 - -
Pste8g00914 549 Gene3D - 64 103 - -
Pste8g00914 549 SMART LRR_CC_2 154 179 IPR006553 -
Pste8g00914 549 SMART LRR_CC_2 180 204 IPR006553 -
Pste8g00914 549 SMART LRR_CC_2 438 470 IPR006553 -
Pste8g00914 549 SMART LRR_CC_2 205 231 IPR006553 -
Pste8g00914 549 SMART LRR_CC_2 387 412 IPR006553 -
Pste8g00914 549 SMART LRR_CC_2 284 308 IPR006553 -
Pste8g00914 549 SMART LRR_CC_2 413 437 IPR006553 -
Pste8g00914 549 SMART LRR_CC_2 309 333 IPR006553 -
Pste8g00914 549 SMART LRR_CC_2 334 361 IPR006553 -
Pste8g00914 549 MobiDBLite consensus disorder prediction 24 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00914 Pste-Chr8 4760939 4762588 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00914 8 4760939 4762588 Pste8g00914 8 4760939 4762588 ECH