Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00885 CGAAAATAGAATATAAGGAAAGCCACACAATAGAGACCTAAAAACGTAACAGGACTCAGAATCTGTCTACCCACTCGAAAGATCCGGCGGCGAGACCCAAAACCGAGGGCTTATTAAAGGGATCCAAATTCAATTCCAACAGATAAAATTTGAAGTCCGCATTGCCTTTAAAAGCACATTCGATCAGCTAGGTTATTGCAGTCTCACGAATCCACAAGCAAAGGGAGAGACACTCAGGGTAGGGCAAGAGAGATAAAGAGTGAGAGTTAAAATGGGAGGTTGGGCTATCGCGGTGCATGGTGGCGCTGGTGTCGACCCTAATCTCCCACTCGAGCGCCAAGAAGAAGCCAAACAACTTCTCACGCGCTGTCTCAATCTTGGAATCTCTGCTCTTCGTTCTAATCTTCCCGCCATTGATGTCGTCGAACTTGTGGTGAGAGAATTGGAAACGGATCCCCTGTTCAATTCGGGCCGTGGATCCGCCCTGACAGAAAAAGGAACGGTGGAGATGGAGGCTAGCATCATGGATGGTCCACAACGTCGATGCGGCGCCGTTTCGGGCCTTACCACCGTTAAGAACCCGATCTCCCTCGCTCGTTTAGTTATGGACAAATCCCCGCATTCCTACCTCGCCTTCTCCGGCGCCGAACATTTCGCCCGGCAACAGGGTGTGGAGGTTGTGGACAACGAGTACTTTATCACACCTGACAATGTTGGCATGCTCAAGCTGGCAAAGGAAGCGAACACAATCCTGTTTGATTACCGAATTCCAACGTCGGGGTACGAGACGTGCGGATCCGGTGTGGAGAGTCCACTACAAATGAATGGACTCCCAATAAGCGTGTACGCACCTGAAACCGTTGGATGCGTGGTGGTGGACCGCGAAGGGCGATGCGCGGCTGCGACATCCACAGGTGGGCTTATGAACAAGATGACCGGTCGAATCGGTGACTCGCCACTGATAGGCGCTGGGACCTACGCGTGCAACGTGTGTGGGGTATCGTGCACAGGTGAGGGCGAGGCCATCATACGTGGCACACTGGCGCGTGAGGTGGCAGCGGTCATGGAATACAAAGGATTGGGGCTTCAACAAGCCGTGGATTTTGTGATAAAGCATCGTTTGGATGAAGGGAAAGCCGGCCTCATTGCCGTGTCCAACACTGGGGAAGTGGCTTATGGCTTTAATTGCAATGGCTTGTTCAGAGGCTGTGCCACTGAAGATGGGTTCATGGAGGTGGGAATCTGGGAATGAATAACTTCATTGCTTCATGGTTGTTTCGATGCAACTGTCCTATGTTAATGAAGTTAGAGTTTATCTATGGTCTTGGTACTACTACTACTACTATGGGTTTAGTTGTTAAGAAATAGAAATGTGAAATAATACTAGTTTCTAGTTGTCTTTTTCTGAAATAAAGACTTGTGCTACACCTTCAGCACACTCGTGTATCTTTTTTCTTCATAACAACTATGACTTCATTTAATTTCCTTCTTTCTTCTCCTTATTTTTATTTGTAAAACCTTTATTTTGTAAATATTATTATTATTGAGGGGTTCCTATGTCTTGTTTCC 1569 0.478 MGGWAIAVHGGAGVDPNLPLERQEEAKQLLTRCLNLGISALRSNLPAIDVVELVVRELETDPLFNSGRGSALTEKGTVEMEASIMDGPQRRCGAVSGLTTVKNPISLARLVMDKSPHSYLAFSGAEHFARQQGVEVVDNEYFITPDNVGMLKLAKEANTILFDYRIPTSGYETCGSGVESPLQMNGLPISVYAPETVGCVVVDREGRCAAATSTGGLMNKMTGRIGDSPLIGAGTYACNVCGVSCTGEGEAIIRGTLAREVAAVMEYKGLGLQQAVDFVIKHRLDEGKAGLIAVSNTGEVAYGFNCNGLFRGCATEDGFMEVGIWE 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00885 326 Gene3D (Glycosyl)asparaginase 196 326 - -
Pste8g00885 326 FunFam Isoaspartyl peptidase/L-asparaginase 196 326 - -
Pste8g00885 326 PANTHER L-ASPARAGINASE 4 312 IPR000246 GO:0016787
Pste8g00885 326 CDD Asparaginase_2 5 318 - -
Pste8g00885 326 Pfam Asparaginase 4 325 IPR000246 GO:0016787
Pste8g00885 326 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 323 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00885 Pste-Chr8 4554206 4556573 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00885 6 286 Miscellaneous Gene Families AT4G00590 27.632 2.78e-18 83.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00885 8 4554206 4556573 Pste8g00885 8 4554206 4556573 ECH
Pste8g00885 8 4554206 4556573 Pste2g01092 2 11711794 11713513 PCT