Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00846 CCACATGCGACCATAGTTTCCCACTTTCCCTTTACCCACGAAAAAATCTCGTTGACTGCATCGAAATAATATCATAAAAATTGACGAAAAAACAACAATAAACGAAGGTCACAAGACAAGAGCAACCTTTGTTCTATCTACATTTTGGACCCGCTTCATTCTCGTTCAACTAACAACTAATCTGAACTGTTCTCACGGATCCCTCATTTTTTTCTTTCTTTTCTTCGTTTAATTCAACGACCCACTTGCGAAGCCAAAACCAATTTTATTAATTCGTGACTGCATCTGAGCTTTCCTCAGTTAGGGTATTTTAAATCCAGTTCATTATTTTCTCAATTGTTGTCATTATTATTCAAAATCTGAAGCGAACCATATTTATTCATGGCTTCGAATTTTGACCGGTGGGAAAAAGATCCTTTCTTTAACGCTGCCGAAGAAGTTCAGGAATCTGCAGACAGGATGGAATCTACGTATAGGACATGGATGCATGCAACAAAAGATGCTTCCTGCATGTGGAACTGTGATGAATTATGCAGAGATCTACGTACTGCCCTTGGCACTGCCAAATGGCAGTTAGAGGAATTTGAACGAGCAGTGAGGTCAAGTTATGGCAAAGGCTCAAGTGAGGAAGTGAGAAATCGGCACCGAGATTTTATCGCTGCCATTGAGGTTAAGATAATGAAAGTTGAGAATGTGTTAAGTGAGTTAGTGGTTCCGGGAGGCAAGGCGTCTCTGCCTTGGTTGCATTTAGATGAAGGAGAACAAAATGAGCTCGCATTGTTTCTTTCAGGAAAGCCAGTAGCTAACAGCATGGACATTGAAGATCCACGGTTGTGCGATAATGTTTCAGACAGTAATTGTTTAAATGATTATGTTTCATCTGGATGGGCTGAAGCAAAGGAGGAGATATCACATGGGCATCGCAGAGCAGCCAGTGCTAGTCCTGATATTGGTTTTTGGAAAATTTCAGTTCATGATGATGTTCAGCAGTGGAGTTCTTCCAGCGGTTCTTCTGGTCCAGTGCATAAGGCACCCAGTTTATCAGGATTTCTTAGCTCCATGGAATCCATCTCTAAGTTGAAGTGGCCTCGGAATGGTTATAGAAAGCTTAAAGCAACTGATCATCATGAAGAAGCTGATAGTGTGCTACTTCCAACAGCTGAATTGAATAAGGGCAAGAATGCACGCTGTGAAAGAAATAAGAGTGGCCTTGATAGTTGTGATGAATATTATGACAAGCAACTCTATGGATGCTATGGTGCTATTCGGAGACAACTTCAAAGATCTCAATACCAAATGCAATACAGTCAGCCTGTTCGAATAGCTGTTTGGATTGTTTTTCTCCTTTGTTTTATTGCTTTAATAGCAGTCCGCGCGTTGTAGAATGAAGATAAAGATACACGATCTATCAATTTGTGGCTGTAGTACAGGCAAGCTACTGATGCTGCTTCATATAGTCCGACATTGTCACTTGAGCAGGAGATAGGTTAGCTGTTTTGGTTCTCACTTAAGCTTTGGGATGGGCACTTAAATTTTTGCTTTTCAATTTTTCCCCTCCCCGTTCCAAAATTGTCCATGAATATCTCTGTTGTCCTACATAAATAGTAAGAATGTAAGATACAGATGATAAAGGGAATTTCCTATTTGATATTGTAATATCTATCGTACATGCCTTCTTGATGCAAGAGCTGTGTTGTTTTGTACCAAAATGATAGTGT 1718 0.401 MASNFDRWEKDPFFNAAEEVQESADRMESTYRTWMHATKDASCMWNCDELCRDLRTALGTAKWQLEEFERAVRSSYGKGSSEEVRNRHRDFIAAIEVKIMKVENVLSELVVPGGKASLPWLHLDEGEQNELALFLSGKPVANSMDIEDPRLCDNVSDSNCLNDYVSSGWAEAKEEISHGHRRAASASPDIGFWKISVHDDVQQWSSSSGSSGPVHKAPSLSGFLSSMESISKLKWPRNGYRKLKATDHHEEADSVLLPTAELNKGKNARCERNKSGLDSCDEYYDKQLYGCYGAIRRQLQRSQYQMQYSQPVRIAVWIVFLLCFIALIAVRAL 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00846 333 CDD SNARE_NTD_STX6-like 11 95 - -
Pste8g00846 333 Pfam Syntaxin 6, N-terminal 11 102 IPR015260 GO:0016020|GO:0048193
Pste8g00846 333 Gene3D - 9 108 - -
Pste8g00846 333 FunFam Syntaxin 10 8 109 - -
Pste8g00846 333 PANTHER OS05G0443700 PROTEIN 1 324 - -
Pste8g00846 333 SUPERFAMILY t-snare proteins 10 107 IPR010989 GO:0016020|GO:0016192
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00846 Pste-Chr8 4357380 4360813 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00846 8 4357380 4360813 Pste8g00846 8 4357380 4360813 ECH
Pste8g00846 8 4357380 4360813 Pste2g01128 2 12276061 12279323 PCT