Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00835 GTAGAAGTAGAACAGATTGTCAAAATGCGTATGGAATGATACATATGGTTGTGCTGACGCCATTTCAGTTTTCTGTTTCCTTTTATGAGCTAAGATATGGTGTAAAGAAAATTTCTGATCTCATTTTAGTTAAACAGAGCAACAAAGATAACAAGTGCAGTGAAATGGACCCGTCTATCATGAAGCTGCTAGAAGATGACGAGGATGAAACCATGCATTCAGGTGTGGACGTGGAAGCTTTCCAGGCTGCCCTAAATAGAGATATAGGAGGAGATGTGTCTACTTCTCAGTTTTCTGGTTCGGATGCAGTGTTGTCTCAAGGAAGCAATAATACATCAAGTCAATCTTTGTCACAGTGGCCTACTTCTAACCATGACAGCAAAACCGACTGTCAAAATCAAGAACAAAAAAATGCACAACAGCGGGAGCAACCTTCATCTGAGATGGAGCAGAAGCAACATGGATCTCTTGTGGAACAACTACAGCATGTCGCTTCTCAGGACGTTAATAATCCTCATTTATCGCAGAAATCTCAAGATGATTGTCACCAAGCACCAGCTGTACAAGTTTCCCTCCACAATTCTCAAGCTATTGGAGTTCAGAATTCTGGAAAAGATCCAGTCCTTGGTAATGAGGTAGTAAAGAATCATAACCCCAGCAGTGAATCTCAGTATGCAAAGTTGCAGCAGATGAGTAATCAACAGGCTACAGTCTCTGAGCAGCCAGGTAGCCAAGGAAATCGTACTAAACAGGTACCATTTGGCCTGTTGTTACCCATCTTGCTTCCTCAACTTGCCAAAGACAGAGCCATGCAACTTCAAACCTTATTTACTAAATTGAAGAAAGATGAAATAACAAAAGACAGGTTTGTACGGCTCATGAAAGGTATCGTAGGGGACCAAATGCTTAGATTAGCATTAGCAAAGGTGCAAATGCAACCACAGACAAGGCCAAATCAAGCATCTGCTGGGCAGCAGCACCCTGTAAGGATGCCAACTGTTAGTTCTGGTGCAAGGCAATTAAATGATCCCCATGCCTTAGCACAGATGCATCAGAGAAGTATGAATGCTGCTGTTGACCAATCTCGCATGACTTCTTCAGTTGGCCAAACTATGGAAAGCAATGCTAGAAAATCTCAGGAATTGGATGTTAAAATAGAATCTCAAGGATTGCAACCAAGCCAATTGCCACCTTCCATTTCCAACACAGTTGGTCACGAAACAGAAAGAACATCGGTTCACATGCCAGGGCTTAATAATAAGCAACAGCAACAACATCTACATTTCTCATCAGCATATGGAAATAGTGGTGGTAACTATAACCCTTTTTCTGGGACTACCAGTAGTTCCACTTCATCTATCAAACCACAACCGCATGATTCACACATCAGTCAAATTCCGCATCAAAGTATTGGTTCAAATCACTTAGGTGGGTCAACACATGGTTTGAATGTAATTGGTATGCCAAAACTTGAACAGCAGAATTCTTTCACTGATCCCAAGAGACTGCCTGGTGGATCTATGTCTCCTGCTGTAAACAATACAGTATCTCAACAAACTTCAAATGCTTGGCAAACATCAACAAACAAAGAACAACATCTGGGCTTAATGTCATCTGTTTCTTATGTCAAAAAGGAACCTAGTGACTTGTCAACTGAGCAGCAAAATAGGCATAATTTGTCTAAATTGCATGGGTATTCTTCTGTTAATTCTTCTCAGCTTGAACATAGTGGGGCTAATCAAGGAACTGCAAAGGATGATTTTTCAAGAGGTCTTCCAACATCCACAAGCATGCCACCTACAACATCTACTGGCTTGCTGTCACACAGTTCTGCTTCCCCTTCTGTAATGAGCCAACTAGACCCTAGTGTCTCGGTAAGCTCTCAGATCCCACCAAATACTTCTGGAATTGTTGCAAGGACACCTCCTAAAAAGCCTGCTGTTACCCAAAAGAAACCACTTGAAGCACTGGGTTCCTCACCTCCTCCTCCAAGTAAAAAACAAAAAGTTTCTGGGGGATCTGTAGAACCAAGCATTGAACAACTTAATGACGTCACTGCTGTTAGTGGAGTTGACCTCAGGGAAGAGGAAGAACAGTTATTTTCAGCACCCAAAGAGGATAGTCGAGTGTCAGAAGCTTCTCGAAAGGCTGTGCAAGAAGAAGAGGAAAGACTGATCTTGCAGAAAGCTCCATTGCAAAAAAAATTAATTGACATCATGGCCAAGTGTGGCTTGAAGGGTATGAGCAATGATGTGGAGAAATGCTTGTCACTGTGTATAGAGGAAAGGATGCGTGGACTGATAAGTAACCTGATTAGAATATCAAAACAGAGGGTTGATTTTGAGAAAACAAGACATAGGACTGTTGTCACTTCTGATGTTCGGCAGCAAATCATGACTATAAATCGGAAAGTAAGGGAAGACTGGGAGAAAAAACAAGCAGAAACAGAGAAGATTCGGAAACTAAATGATGTTGACAGCAATACTGGAGTTGATGGTGACAAGGAGAGGGACGACAGCCATTCTAAATCAACAAAGGTGAACAAGGAAGAGGATGACAAGATGAGGACAAATGCTGCAAATGTTGCTGCTCGTGCTGCTTATGGGGGAGATGACATGCTGTCAAAGTGGCAGCTTATGGCTGAGCAAGCCAAGCAGAAACGTGAAGGGGGGGTGGACATGTCATCTAGTTCTCAACCAGCTAAAGACGTGAACCGCAAATCTTCAACATCTGGAAGAAGTACAAAGGATAACCAAGAAGGGGAGAAAAAAGGTTCATCCACTTTTATATCAAGTTCAGTGGCTAAAAAACTTGGGAGGTATCATGCCATGGCACCTCAAACTAGGGTAGCTCGAAGCATCTGTGTCAAGGATGTGATTGCAGTCCTGGAGAGGGAACCCCAGATGTCTAAATCTCCACTCATACATCGCTTATACGAGAGAATTCTTTCTGATGCCCCAGTTGAACAGGGTTAAGCCAAGTACCTGAGTCATGTTGGTTTTCGAATTTTTTCGCTTAGCTTATTATTAAGTATTATAATCATATGCTTGCCACGGAAATTGAGAGTTTTCATCAGGGTCGAAATCAGCTTTTTGACTTGCACTAAATATTAGCTCGGATAGTTTACCTGTTGAATTTGATGTTTCTACTGTATTCATGATTGCCTTGTGAGAGGTTTACCTAGTTTTCGGTTCCATGTGTGTATTCTTTAATGTAGTGACTTAGTAAAATTGGAAAATTAGTTCAATTAAACAGATACCTTTCACAGGGCAGGCATTTTAGCTCCAGTGATGCTACTAAATACTAACACAACAAGACACCT 3322 0.4172 MIHMVVLTPFQFSVSFYELRYGVKKISDLILVKQSNKDNKCSEMDPSIMKLLEDDEDETMHSGVDVEAFQAALNRDIGGDVSTSQFSGSDAVLSQGSNNTSSQSLSQWPTSNHDSKTDCQNQEQKNAQQREQPSSEMEQKQHGSLVEQLQHVASQDVNNPHLSQKSQDDCHQAPAVQVSLHNSQAIGVQNSGKDPVLGNEVVKNHNPSSESQYAKLQQMSNQQATVSEQPGSQGNRTKQVPFGLLLPILLPQLAKDRAMQLQTLFTKLKKDEITKDRFVRLMKGIVGDQMLRLALAKVQMQPQTRPNQASAGQQHPVRMPTVSSGARQLNDPHALAQMHQRSMNAAVDQSRMTSSVGQTMESNARKSQELDVKIESQGLQPSQLPPSISNTVGHETERTSVHMPGLNNKQQQQHLHFSSAYGNSGGNYNPFSGTTSSSTSSIKPQPHDSHISQIPHQSIGSNHLGGSTHGLNVIGMPKLEQQNSFTDPKRLPGGSMSPAVNNTVSQQTSNAWQTSTNKEQHLGLMSSVSYVKKEPSDLSTEQQNRHNLSKLHGYSSVNSSQLEHSGANQGTAKDDFSRGLPTSTSMPPTTSTGLLSHSSASPSVMSQLDPSVSVSSQIPPNTSGIVARTPPKKPAVTQKKPLEALGSSPPPPSKKQKVSGGSVEPSIEQLNDVTAVSGVDLREEEEQLFSAPKEDSRVSEASRKAVQEEEERLILQKAPLQKKLIDIMAKCGLKGMSNDVEKCLSLCIEERMRGLISNLIRISKQRVDFEKTRHRTVVTSDVRQQIMTINRKVREDWEKKQAETEKIRKLNDVDSNTGVDGDKERDDSHSKSTKVNKEEDDKMRTNAANVAARAAYGGDDMLSKWQLMAEQAKQKREGGVDMSSSSQPAKDVNRKSSTSGRSTKDNQEGEKKGSSTFISSSVAKKLGRYHAMAPQTRVARSICVKDVIAVLEREPQMSKSPLIHRLYERILSDAPVEQG 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00835 979 MobiDBLite consensus disorder prediction 556 624 - -
Pste8g00835 979 MobiDBLite consensus disorder prediction 202 238 - -
Pste8g00835 979 MobiDBLite consensus disorder prediction 870 916 - -
Pste8g00835 979 FunFam Transcription initiation factor TFIID subunit 4B 713 760 - -
Pste8g00835 979 MobiDBLite consensus disorder prediction 339 370 - -
Pste8g00835 979 MobiDBLite consensus disorder prediction 342 365 - -
Pste8g00835 979 MobiDBLite consensus disorder prediction 808 845 - -
Pste8g00835 979 MobiDBLite consensus disorder prediction 410 452 - -
Pste8g00835 979 MobiDBLite consensus disorder prediction 305 327 - -
Pste8g00835 979 Coils Coil 112 132 - -
Pste8g00835 979 ProSiteProfiles RST domain profile. 233 304 IPR022003 -
Pste8g00835 979 MobiDBLite consensus disorder prediction 88 145 - -
Pste8g00835 979 Pfam RCD1-SRO-TAF4 (RST) plant domain 236 299 IPR022003 -
Pste8g00835 979 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 49 970 IPR045144 GO:0005669|GO:0006352
Pste8g00835 979 MobiDBLite consensus disorder prediction 878 903 - -
Pste8g00835 979 Gene3D Histone, subunit A 715 760 IPR009072 GO:0046982
Pste8g00835 979 Pfam Transcription initiation factor TFIID component TAF4 family 670 965 IPR007900 GO:0005669|GO:0006352
Pste8g00835 979 MobiDBLite consensus disorder prediction 652 670 - -
Pste8g00835 979 MobiDBLite consensus disorder prediction 187 238 - -
Pste8g00835 979 CDD TAF4 666 965 IPR007900 GO:0005669|GO:0006352
Pste8g00835 979 MobiDBLite consensus disorder prediction 483 520 - -
Pste8g00835 979 MobiDBLite consensus disorder prediction 556 670 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00835 Pste-Chr8 4306915 4314477 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00835 8 4306915 4314477 Pste8g00835 8 4306915 4314477 ECH