Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste8g00794 AAAACCTTTCTTACTCTTCTCTTTCTGATGACATCCATCATTGCCTTTGAAAAATCTGTAATATCTGTGTCTCTTTTCTCTCTTCGCTTTTTTGTGTTCCCATTGGTTATAACTTATAAGTTATGTGGTTTTGTTTTCCGTTGCATGAACGTTCAAGACCAATGTTGCGTGGCATTCTTAATAGTAATGATAGTCCACTCCAAACATTCCAACCGTGTTCATCAATCTACAAATTGTAATGCATTGTTGAATTTTAAAAGAATTGTGTTTGTTGAAGGTGTTGAGCCCCTTGTGAAAGGGTTCATTGAGAAAGTGACAAGTGATTTGTGTTGGGTTCACTTTGAAATCCACACTTTTTGGAAGATGTTGTGTGCTTGTTCTGGGGAGCAATTCAAATTTGAAGAGGCGCCACGGTCACCTGAGTCCTTGGCAACAAGGGATTTCTCTGCAAGTGGCCTTTCTTCAAGGACTGGTGATTGGGAATCCAAATTTGATGAAACACAAGTGGAAGATGTTGAATCTACTCTAAAAGAAGCTCTCTCGTTAAACTATGAGGAAGCTCGGGCTTTGTTGGGGAGGCTTGAATATCAAAGAGGGAACTTCGATGGTGCCCTTCAAGTGTTTGAGGGTATAGACATAAGGGCCTTGGCTCCAAGGATGATCAAGGCTATAGCTGAAAGAACCAAGCAAAGAAAACCAAGGTCCAAAGTGGATAATGTGCTTCCTAATGTGATGTCTATGCATTCAGTAAGCCTGCTTCTTGAGGCAATTTTGCTTAAATCCAAATCCTTAGAAGAACTTGGGCGATACAATGAGGCTGCAACGGAGTGCAGAATTGTTGTGGATACAGTTGAATCTGCTCTTCCTAATGGAATGCCTGAGAGTATTGGTGAAGATTGTAAGTTGCAAGAAATGTTCCACAAAGCATTGGAGTTGCTTCCAAATCTATGGATCAAGGCAGGTTTCCTAGATGAAGCTGTCACTGCTTATAGGCGGGCTCTATTAAAGCCCTGGAATTTGGAGCCGGGAAGGTTGGCCTGTGTACAAAAAGATTTAGCTACCACACTACTCTATGGTGGTGTTGAAGTAAATCTACCCTCTCAGTTTCAAGTGAAGGGTGGTCTAACAACACCCATGAGTGGCACAGAAGAGGCTATACTTTTGCTATTAATACTCTCAGGAAAGATGGCACTTCAGGAAATAGATTGGGACCCTGAAATAATGGATCATCTTACATTTTCACTTTCAGTTACTGGGATGTTTGAATCATTGGCAGATCATGTCCAGAAGATCCTTCCAGGTATTTATGATCGAGCTGAGAGGTGGTACTTTCTTGCTCTTTGTTACAGTGCAGCTGGAAAGAATGAAGTAGCCTTGAACCTTTTGAGGAAGGCTTGTGGTAGTTCTGAAGCAAAGCATAGACCCCATTTTCCTTCTTTTTTGTTTGGTGCAAAGGTTTGTTCTATACATCCAAACCATGCTCATGAAGGAATTAAATTTTCACAGGAAGTTATTGAACTAGCCAAGCATCAAAATGAGCATTTTTTGGGTATGGGCCAAAAATTTCTTGGCATTTGCCATGGGGCTGCTGCTAGAATATCTGTACTGGATTCTGAAAGAATTATATTTCAAAGAGAGTCTTTGAAGTTTCTAAATGATGCTGCTCTAAATGGAAATAATGACCCAGAAATGATATTCAGCCTTGGACTAGAGAATGCAATCCAAAGAAATCTAAATGCAGGTTATGACAATATAATGATGTACTCAGACATGATAGCTGGCAGCTCAAAAAGAGGTTGGCAGCTGTTATCACTCATAGTGTCAGCACAGCAGCGGTTTAAGGATGCAGAAACTATAGTTGATTTTGCTTTAGACGAGGTATGTAGTATAGATCAGTTAGAACTACTGAGACTGAAAGCTGTACTTCAAATTACTCAGCAGCAACCCAAGCAAGCAATTGAGACCTACAGAATATTGCTAGCAGTAATTGAAGCAAGAAGAGAACATGGGCTTCAAGCTAAGACATTCAAGCATGAGGCACTAACAGAACAGAAGTTGGAAATGGATGTCTGGCAGGATTTGGCTACCATTTATGCAGATCTTAGTTCCTTTCTTGATGCAAAGGCTTGTGTTCACAAATCCCAATTAATAGAATTGTTTTCTCCCAGAAGTTGGCATATCACTGGGTTGTTGTTTGAAGCTCAATCATTGCATAAGGAGGCCTTTGTTTCTTTCTCAGTCTCATTGTCAATAGAACCGGATTACATTCCTAGTATCATTTCAACTGCAAAATTGTTGCTTAAACTTAGCACGCAATCCCTCCCAATTGCAAGAAGCTTTTTAATGAATGCTTTGAGATTAGATCCCACAAACCATGATGCATGGTTTAACCTTGGATTGGTTTCAAAAATGGAAGGTTCCTTACAACAAGCAGCAGATTGCTTTCAAGCTGCATATGAGTTGAAGCTTTCAGCTCCAGTGCAAAACTTCAACCAAGAGCATTATACAAAAGCCATGAGCAGCAAGAGTAATGGAAAAGGAAATATACCCGTGTTTAAAAGATATATTTGTGAAGAACCCTCTATATCTAGCTACTTATTTATAGATTTCCTTAATTATATTCCAACTAGATGA 2634 0.3975 KTFLTLLFLMTSIIAFEKSVISVSLFSLRFFVFPLVITYKLCGFVFRCMNVQDQCCVAFLIVMIVHSKHSNRVHQSTNCNALLNFKRIVFVEGVEPLVKGFIEKVTSDLCWVHFEIHTFWKMLCACSGEQFKFEEAPRSPESLATRDFSASGLSSRTGDWESKFDETQVEDVESTLKEALSLNYEEARALLGRLEYQRGNFDGALQVFEGIDIRALAPRMIKAIAERTKQRKPRSKVDNVLPNVMSMHSVSLLLEAILLKSKSLEELGRYNEAATECRIVVDTVESALPNGMPESIGEDCKLQEMFHKALELLPNLWIKAGFLDEAVTAYRRALLKPWNLEPGRLACVQKDLATTLLYGGVEVNLPSQFQVKGGLTTPMSGTEEAILLLLILSGKMALQEIDWDPEIMDHLTFSLSVTGMFESLADHVQKILPGIYDRAERWYFLALCYSAAGKNEVALNLLRKACGSSEAKHRPHFPSFLFGAKVCSIHPNHAHEGIKFSQEVIELAKHQNEHFLGMGQKFLGICHGAAARISVLDSERIIFQRESLKFLNDAALNGNNDPEMIFSLGLENAIQRNLNAGYDNIMMYSDMIAGSSKRGWQLLSLIVSAQQRFKDAETIVDFALDEVCSIDQLELLRLKAVLQITQQQPKQAIETYRILLAVIEARREHGLQAKTFKHEALTEQKLEMDVWQDLATIYADLSSFLDAKACVHKSQLIELFSPRSWHITGLLFEAQSLHKEAFVSFSVSLSIEPDYIPSIISTAKLLLKLSTQSLPIARSFLMNALRLDPTNHDAWFNLGLVSKMEGSLQQAADCFQAAYELKLSAPVQNFNQEHYTKAMSSKSNGKGNIPVFKRYICEEPSISSYLFIDFLNYIPTR 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste8g00794 877 Gene3D Tetratricopeptide repeat domain 141 363 IPR011990 GO:0005515
Pste8g00794 877 SUPERFAMILY TPR-like 439 822 IPR011990 GO:0005515
Pste8g00794 877 Gene3D Tetratricopeptide repeat domain 710 821 IPR011990 GO:0005515
Pste8g00794 877 ProSiteProfiles TPR repeat profile. 792 825 IPR019734 GO:0005515
Pste8g00794 877 Coils Coil 177 197 - -
Pste8g00794 877 SUPERFAMILY TPR-like 255 468 IPR011990 GO:0005515
Pste8g00794 877 PANTHER PROTEIN NPG1 122 831 IPR043376 -
Pste8g00794 877 Gene3D Tetratricopeptide repeat domain 393 709 IPR011990 GO:0005515
Pste8g00794 877 SMART tpr_5 633 666 IPR019734 GO:0005515
Pste8g00794 877 SMART tpr_5 792 825 IPR019734 GO:0005515
Pste8g00794 877 SMART tpr_5 722 755 IPR019734 GO:0005515
Pste8g00794 877 SMART tpr_5 439 472 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste8g00794 Pste-Chr8 4067411 4071035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste8g00794 122 830 Calmodulin-binding Proteins AT1G27460 57.504 0.0 835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste8g00794 8 4067411 4071035 Pste8g00794 8 4067411 4071035 ECH
Pste8g00794 8 4067411 4071035 Pste2g01165 2 12698870 12702418 PCT