Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pste7g02020 | AAGTGGAAGCAGTTTGGTGTTGAGTCAGAGGTTCCTATAGAGTATAGCCACTTGTTTTAACTTGAAAATCCATTTTGCTTAATTTCTCACATATTATTCTCCATGGAGAACTTGTTGGGTCTGCTGAGAATTCATGTTGAAAGAGGTGTCAATCTTGCTATCAGGGATGTGGTGAGTAGTGACCCTTATGTTGTCATCAAAATGGGCAAACAGAAGTTGAAGACTAAGGTAATCAAGAAGAACCTAAATCCTGAATGGAATGATGACTTGACCTTGTCTATTTCAGACCCTCATGCTCCAATCCATCTTCATGTGTACGACAAGGACACATTTAGCTTGGATGACAAAATGGGGGATGCTGAATTTTACATTGGTCCATTTATTGAAGCAGTGAAGATGCGGTTGGCAGGTCTCCCCAATAATACTATAGTTACGAAAGTGCTACCTAGCAGACAAAACTGCTTCGCAGAAGAGAGTCACATTGTGTGGAAGGATGGCAAAGTTGTCCAAAACATGGTTCTTAGACTAAGAAATGTTGAGTGTGGGGAAGTGGAGCTCCAGTTGTATTGGATTGACATTCCTGGTTCAAGGCATTTCTAGATCACAGTCCAAAATATGGTTCTGAGAGTTGACATACTGTAAAAAAAATTAGATTTGCTGCCTTATAAACCAGCAGCACCATATCCTTTTATTTCTTTCGCACCACATAAAAACTGTTCAAGATGTGGGTTTGTAATAGACGGTATTGCAATTACTATAGTAGTTAGTGAGAAGTAATCGGAGATGGTGTTTCCTTGCTACAATTTAGACGTTGAATTATGCCAGCCTTCTATAGTAATGTACAAGAAGCGTTAAAGAAAGGTGTTACGTGTAATTAGAATCTCATTTATATGTTAATCGCGTAGTGATGGATTAAATTTTGCAGCTATTAATTGTTTAAACACTATACCGGTGATATAATGGGTTCTATGATAACTGTGTTCTTTATTTTCCTTTTGGGATCTGATTCATGGTGACAAAATTAAC | 1026 | 0.3791 | MENLLGLLRIHVERGVNLAIRDVVSSDPYVVIKMGKQKLKTKVIKKNLNPEWNDDLTLSISDPHAPIHLHVYDKDTFSLDDKMGDAEFYIGPFIEAVKMRLAGLPNNTIVTKVLPSRQNCFAEESHIVWKDGKVVQNMVLRLRNVECGEVELQLYWIDIPGSRHF | 165 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pste7g02020 | 165 | Pfam | C2 domain | 6 | 91 | IPR000008 | - | |
| Pste7g02020 | 165 | CDD | C2_ArfGAP | 5 | 148 | - | - | |
| Pste7g02020 | 165 | PANTHER | PROTEIN C2-DOMAIN ABA-RELATED 4 | 3 | 162 | IPR044562 | - | |
| Pste7g02020 | 165 | SMART | C2_3c | 7 | 102 | IPR000008 | - | |
| Pste7g02020 | 165 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 2 | 157 | IPR035892 | - | |
| Pste7g02020 | 165 | ProSiteProfiles | C2 domain profile. | 1 | 106 | IPR000008 | - | |
| Pste7g02020 | 165 | Gene3D | C2 domain | 3 | 164 | IPR035892 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pste7g02020 | Pste-Chr7 | 18547041 | 18549455 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Pste7g02020 | 38 | 165 | C2H2 Transcription Factor Family | AT1G70790 | 56.923 | 4.72e-49 | 153 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Pste7g02020 | 7 | 18547041 | 18549455 | Pste9g01436 | 9 | 13773524 | 13776208 | ECH | |
| Pste7g02020 | 7 | 18547041 | 18549455 | Pste7g02020 | 7 | 18547041 | 18549455 | ECH | |
| Pste3g04102 | 3 | 36198115 | 36200146 | Pste7g02020 | 7 | 18547041 | 18549455 | ECH | |
| Pste1g02532 | 1 | 9424485 | 9432935 | Pste7g02020 | 7 | 18547041 | 18549455 | ECH |