Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g01061 CTCTCCCTCTCTCATTATCTCACTCACTGCTACTCACTCTAGTGAGAGAAGGAAACCACGCAGAGTTGAAAATGGCTCTGCGCACCGTTTCTTCGCTTCAATGAATAAGCTCTTCTTCAAAGAAGAAAATGGCTCTCGGCGACGACGCAAAACACCACTCTCCTTTGTTCCTCGATGCCCTTCTCTGCGAAGAGCGTGACACCTTCGAGGAAGAGTTTGATGTGAACGGTGACGAGTGTGAGACCAATAATGATGACCCATCTGCGAGAAAGTCACAATCTTTGCCCTTGGTTTTGCTGGACAATGATTTGTTCTGGGAAGATGAAGAGCTTGTGACGTTAATCTCGAAAGAGGGAGAGACCCATTTGCGTTCTCTTAGTGTTATTGTTGAGGAGTCCTTGGAAGGGCCTCGTTTGGAGGCTGTGAACTGGATTTCAAAAGTTTGTGGACACTATGGCTTCTCTGCTTTGACCACTGTTCTTGCTGTCAACTACTTCGATAGGTTCATCACAAGTGTGAGGTTTCAGAGGGACAAGCCATGGATGACACAGCTTACTGCTGTTGCTTGTTTGTCCCTTGCTGCAAAAACTGAAGAGACCCATGTGCCACTCCTTTTGGATCTTCAAGTGGAGGAGACGAGCTTTGTGTTTGAAGCCAAGACTATTCAGAGAATGGAGCTGCTTGTGTTGTCCACTCTTAAATGGAGGATGCACCCGGTGACCCCTATTTCCTTCTTTGAACACATTGTCAGAAGGCTTGGTTTGAAGAGTCGCTTGCATTGGGAGTTTCTACGGCGTTGTGAGCGAATTCTTCTCAATGTCATTGCCGATTCAAGGGTTATGAGTTATCTTCCTTCTACGTTGGCCGCTGCTACCATGATCCATGTTATTAAAGAGATTGAATCATTTAATGCGACTGAGTACATTGATCAGCTTCTGGGTTTATTAAAGATTTGCGAGGAACAAGTGATTCAGTGCTACAAACTGATGCAGAAACTATTAGGTTGCTATGAAGGCATTTACAGCCTTCGCCAGAAACGAAAGCGTCTTTCCGAACCTGGTAGTCCGGGAGGTGTCATTGATTCATCTTTCAGTTGTGATAGCTCAAATAATTCGTGGGCTGTGTCATCAGTCTCACTTTCTCTGGAGCCGTTGTTCAAGAGGAGCAGAGCTCAGGATCAGCAAATGCGATTGCCTTCTATTAATCGTGTGTCAATTGATGTTCTTAATAGCCCTCGTTAATAATGGTCTCAGTATGTACTTCAAATGTGGTAGCTTTCTTTCATATAAATCTGGCATTTATGTTATTGAAATGCAACTAAATTATGTTCTTAGTTATAAACACTTCTAGCCAAAATTTGAAAATTAATGAGGCAGAGACTGAGATACCCTTCTCCATTTTGGCGTTTAAGGTGGAACAGGGATCTGATATTGAGTAGAAATGAGTTATAAACTTGTAATTCTACCTGAGTTATATTTTCAGTGTAGTTTTTACTCATGCATGATATTTGTCCATAAGCACAATCAAGAGACTTCCTTTGCTTATCGTCTGCCAATCCGCCGATCTATCCCCTGTTTATGCAGATTAAGAACTGCACATGTAGATTGCTAGTGTTAATCATAGCTGGTTGAAGTATATTTAGTGATACATTAGATTTATCGATGAATCTCTTGACCGATCTATCCTCTTGGTCATTTTTTATGCTCGTGATTTCTTCTATAATGCATATCGTTCTGTTACATTCCC 1746 0.4221 MALGDDAKHHSPLFLDALLCEERDTFEEEFDVNGDECETNNDDPSARKSQSLPLVLLDNDLFWEDEELVTLISKEGETHLRSLSVIVEESLEGPRLEAVNWISKVCGHYGFSALTTVLAVNYFDRFITSVRFQRDKPWMTQLTAVACLSLAAKTEETHVPLLLDLQVEETSFVFEAKTIQRMELLVLSTLKWRMHPVTPISFFEHIVRRLGLKSRLHWEFLRRCERILLNVIADSRVMSYLPSTLAAATMIHVIKEIESFNATEYIDQLLGLLKICEEQVIQCYKLMQKLLGCYEGIYSLRQKRKRLSEPGSPGGVIDSSFSCDSSNNSWAVSSVSLSLEPLFKRSRAQDQQMRLPSINRVSIDVLNSPR 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g01061 370 Pfam Cyclin, N-terminal domain 93 194 IPR006671 -
Pste7g01061 370 CDD CYCLIN_AtCycD-like_rpt1 95 192 - -
Pste7g01061 370 SUPERFAMILY Cyclin-like 64 195 IPR036915 -
Pste7g01061 370 SMART cyclin_7 100 188 IPR013763 -
Pste7g01061 370 SMART Cyclin_C_2 197 325 IPR004367 -
Pste7g01061 370 SUPERFAMILY Cyclin-like 179 292 IPR036915 -
Pste7g01061 370 Gene3D - 91 195 - -
Pste7g01061 370 FunFam CYCLIN D32 196 285 - -
Pste7g01061 370 Pfam Cyclin, C-terminal domain 197 293 IPR004367 -
Pste7g01061 370 Gene3D - 196 285 - -
Pste7g01061 370 FunFam D3-type cyclin 88 195 - -
Pste7g01061 370 CDD CYCLIN_AtCycD-like_rpt2 197 287 - -
Pste7g01061 370 PANTHER CYCLINS 91 295 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g01061 Pste-Chr7 9727113 9729201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g01061 15 360 Core Cell Cycle Gene Families AT5G67260 51.831 5.16e-108 320
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste2g01088 2 11655219 11656878 Pste7g01061 7 9727113 9729201 ECH
Pste8g00909 8 4718292 4720308 Pste7g01061 7 9727113 9729201 ECH
Pste7g01061 7 9727113 9729201 Pste7g01061 7 9727113 9729201 ECH