Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste7g00238 ATGGTGCCGCCACCAGAGGACATGTCACTCACACCCACAGACCAAGACCTTAATTTGGGTCGAAAAACCAACTCAGTTCCAAGACCAGCACCCGAACAAGGCTTAAAGTGCCCCCGGTGTGACTCTGCAAACACCAAATTCTGTTACTACAACAACTATAGCCTCACTCAGCCCAGGCACTTCTGCAAAACATGCAGAAGGTACTGGACCAACGGTGGGGCCCTCCGAAATGTCCCAATTGGGGGTGGTTGCAGGAAGAACAAGAAGGCCAAAGCCTCTTCTTCCTCTTCCAGATTCTCCTGTGAATTCAACTTTGAGGGTCTTACAGTTCCATCAAATGTTGAATTTGGTAGGTTAGCCTTCCCCTCCAGGCTCCAAACTCAACACCACACCCCTGTGTTCAACCCGTTTCCCTCTTTCGGTGGTGATGGTTCATCATCTTCTCTTACAAACAATGTTTTATCTGGGTTCCAGCAACTGGAACCCAGACAAGTGTTGTCCAACTCTCTGATGAGTTTGGCCCCACCCAGTTCCGATCTCTGGAAACTAGGTAGGACACAGAGTTCGACAACGATCACTGATCCATTGAACCCATTAACCAGTGCCATGCATTCTATGGCATCTATGCAACCTATGCTGCAGCAGCCGTCAGTGAACGTGAACAACAACCTTGCTTCTTCAATTGAGTCACTCAGCAACATCAACCTGGACTTACACCTGAAGCTTCAGCAGCAGCGTTTGGCAATGATGTATGATGGGGACAATGTCAACAACAACAACAAACATGATGACAACTACGTTAACGTGTTTGAGAATCAGAGGCTGATGCAGCAACCCTTTAATTTGTTTCAGAACCTTGAGATTTCGAAGCCTGAGAATTTGCCAGCTGGCAGTTCAGTTAACGAAGGCCCAAGTGGGGCACCAACAGTTACAGGAACAGGAACAGTACCCACCGAATGGTTCTTCGGGAATTCCTTTCCCTCTGTAACGCATTCTGCAGCACCAAACAATGTTAATGGCAATGGTAATGGCATTAATGATGTAAACAACAACTGGGGTGGTGCCCTTGCTTGGGGGGATTTGCAGCATCAACAATACAGTGCTTTGCCCTAG 1113 0.478 MVPPPEDMSLTPTDQDLNLGRKTNSVPRPAPEQGLKCPRCDSANTKFCYYNNYSLTQPRHFCKTCRRYWTNGGALRNVPIGGGCRKNKKAKASSSSSRFSCEFNFEGLTVPSNVEFGRLAFPSRLQTQHHTPVFNPFPSFGGDGSSSSLTNNVLSGFQQLEPRQVLSNSLMSLAPPSSDLWKLGRTQSSTTITDPLNPLTSAMHSMASMQPMLQQPSVNVNNNLASSIESLSNINLDLHLKLQQQRLAMMYDGDNVNNNNKHDDNYVNVFENQRLMQQPFNLFQNLEISKPENLPAGSSVNEGPSGAPTVTGTGTVPTEWFFGNSFPSVTHSAAPNNVNGNGNGINDVNNNWGGALAWGDLQHQQYSALP 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste7g00238 370 ProSitePatterns Zinc finger Dof-type signature. 37 73 IPR003851 GO:0003677|GO:0006355
Pste7g00238 370 Pfam Dof domain, zinc finger 33 89 IPR003851 GO:0003677|GO:0006355
Pste7g00238 370 ProSiteProfiles Zinc finger Dof-type profile. 35 89 IPR003851 GO:0003677|GO:0006355
Pste7g00238 370 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 27 217 IPR045174 GO:0003700|GO:0006355
Pste7g00238 370 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste7g00238 Pste-Chr7 2222113 2223225 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste7g00238 32 370 C2C2-Dof Transcription Factor Family AT5G65590 38.643 7.98e-46 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pste7g00238 zf-Dof 1.1e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste1g01337 1 4234202 4235215 Pste7g00238 7 2222113 2223225 PCT