Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g03495 atgggcaccccggacaagaaaatatctgattttgttgatatagttaggtcttggatccctcgaaggacagagccaccaaatgtgtcgagggatttctggatgcccgatcagagttgcagggtatgctatgaatgtgattcacagttcacaatattcaaccgcaggcatcactgtcgaatttgtggccgtgttttctgtgcaaaatgcactgccaattctgttcctgtgccatcagatgagccaaatactggccgtgaagattgggagagaataagggtctgtaactattgttttaaacaatgggagcaaataacaacagttgataataatggcagtgcagacccttcagccaccccttgtctcagcccttcaccatctacaacaagcttggtcagcactaagtccagttgtacctgtcacagtagcagcagcactgctggttcagttccttatacaactgggccttatcagcgtgttccttatagtccccgtcattcttcacaaatgaatcatataacagatgagcaagaaaatttaaattctgggaggagtacaaattcctctgaagctgtagggaatttgacttctaaccaatttggctattgcttcaacaggagtgatgatgaggaagatgattatggtgtttatcattctgatacagaatcaaggcattattctcatgcccatgattatgacgatccagttaacattcatggggttgaccatgtctatgggccacatcaaattcatcctgatgaagataacattcaggaaaaaagctttagttgcctaactgcaccagagaatcttcatctagaaggtgtaggtggaattcaagcttctgagaaagaagctgatgagcacgatcatgctgatggatgtgaaacttctccttatcatgaggagagcaataatgcggagcctgtagattttgagagtaatgtcctactgtggctacctcctgagccagaagatgaagaggatgatagagaagctgttcttttcgatgatgacgaagatgacggtactactggaggtggggaatggggatatctacgatcctccactagttttggctctggagaatgtcgtactcgagataaaacaagtgaggatcataggaaggccatgaaaactgtagtggaagggcattttagggctctggtagcccagctcttacaagtggaaagcctaactatttgtgatgaagatggaaaagaaagttggttggatataattactgctttgtcttgggaagctgctacacttctgaagccagatatgagcagaggtggaggtatggatcctggtggatatgtaaagattaaatgtatagcttgcggacatcgaagtgaaagcatggtggttaaaggagttgtatgtaaaaagaatgtggctcatcgacgaatgacatcaaaaattgataaaccacgttttctaatacttggaggtgctttggagtatcagcgtgtttctaaccagttgtcaagtgttgatactttgttacagcaggagatggaccatttgaaaatggcagttgcaaggattgatgctcatcaccccaatgttcttttggtggagaagtcagtatctcgttatgctcaagaataccttcttgctaaagacatatcacttgttctgaacattaaaaagccacttttagagcgtattgcccgttgtactggtgcacagattgtcccttcaattgatcatctgacctctcagaagctgggatattgtgaaacatttcatgtggacaaatattttgaagagcatggtagtgctgggcaaggtgggaaaaaattaacaaagactttgatgttctttgagggctgcccgaaacctttaggttgcactatcttgctgaagggtgccaatggggatgagttgaagaaggtgaaacatgtgatccagtatggagtctttgcagcctatcatctggctctggagacatcttttctggctgatgaaggtgcttcacctctagagtttcccttgaaatctcccataaccgttgcattacctgataaaccatctagtattgtgagatctatttccactatccctggattttctgttctcactcccagagagtctcaaggagcaaaacctttgaaagaagtagcaaaatctaatgacatctacaacacagaaaaagccccatctagcttcagtgagtccactgaaagatcattggtcagtgactcaatccatatgcatgaagtgtctggagaagtcaccctatcagctcaggatatgccatctttccaccgcagtagtttcctttcaaattctgcttctaaagaggatgataagaaatttcccaacgaattttttcaatacagaccagatgagaaaagggaaactatgttgaataatgatcttatgccagattcttttggtacctttgagttttcacagcaagatggcaatagcctcctcagagctgcagcattgtctgcaaaccaaggagctaaccttgagccaccttatgtaaaacatgacactaatgataataataacaacaatgatcatggtgacatgatacattcaaaagaagattttcctccctcaacttctgatcatcagagtattttggtctttttatcaacacgttgtgtgtggaaaggaactgtttgtgaaaggtcccatcttgtaagaattaaatactatggaagttctgataagcctttgggacggtttttgagagatcagctacttgatcagagttacacttgctgctcatgtgagttgccatcagaagctcatgttcattgttatactcatcggcaaggcagcctgacaatttctgttaagaaactatctgagtctcctctgccaggggaacgagaaggtaaaatttggatgtggcacaggtgccttaaatgtcctcgtgtaaatggttttcctcctgctacacgaagagtaattatgtctgatgctgcctggggcttatcctttgggaaatttttggagctcagtttttcaaatcatgcagctgcaagcagggttgcaagttgtggtcattctctacacagagattgtttaagattctatgggtttgggaagatggttgcctgctttcggtatgcttcaattcatcttcattctgtttatcttcccccacctaaacttgaattcaactatgataggcaggattggatacaaaaagaagccaatgagctgcaaaagaaggctgacatgctgtttagtgaagtgcgaaatggtctgcatcaaatttcagagaaggtttcaggtcctctgttgcaggagggtggaaatagggtgacagattttaggaatctgcttgctgaacttaaaggtttgctgcagtgtgagaatgaagaatttgaggactcgtttaaaaaattgttgcataaagagagcaaacctggtcagcctgtgattgatattctagagctcaataagttgcgcagacatatccttatccattcttatgtttgggaccagcgtttgatatatgcatccaatttaagtaaaattattcttcaagaaaattcaaagagcttaaatcatagagagaagttgcttggttccagggaaaaggttattgaagcagatgttgccactaggacggcaaggggccatagcagttgtgattccttccttttggaaataaaacctgaaggaaacctacatttagaaacctctagccacattagccaccctgtggttaaaagtgaggacaagggtaaagacacaaatcatgataaggttgatctttctctttctagtggtgcaaatatcaatgataaatctgaatctgtggagattggaggggctgtacggagggctttgtctgagggggaatctcctgttgtggctaatttatctgatacccttgatgctgcatggacaggcgaaagctaccctacaaattcatcactcaaagaaaatggttgtctacctcctgatgcagcagctgtggcttgtcattcacctggggcaaatattgttacatcaaaatcaagttctgatttttatacttctgatatgggtggcattgaggcaggatgcactaattacgctaaattgctttccaaaggacttgatactaaatggaaaggaatgccttttgctaacttctttggttcattcaacaaaagttcttctttcaatacacagaagcttgttgagtacagcccaattcacattttatcatttcgagagttggagcgccagactggtgctagactgcttctgccagccggcgctaatgataccatagtgcctgtctacgatgatgaacccactagtgttatagcatatgtgcttgtgtcaatggattatcatatgcagatgtcagaatatgatagacctaaagacagtggagacagttcaatttcattaccactctttgattcaacaagtctactttctcttaactcttttgatgagaccattactaatacctacagaagtctaggctccttcgatgaaaacatgttatccacttctgggtctcggagtttgtcagttggggatccactctcatacaccaaggatttgcatgcaagggtttcttttaccgacgatagcttccttggaaaagtgaaatatactgtaacttgctactatgcaaagagatttgaagctttaagaagaacttgttgcccttctgagttagattttgtgcggtcccttagtcgttgtaagaagtggggagctcaaggaggaaagagcaatgttttctttgcaaaaaccctggacgatagatttattatcaagcaggttacaaaaacagagcttgagtcatttactaagtttgcaccagcttattttaagtatttatctgagtcaatcagtacaggaagcccaacctgtcttgccaagatcttgggcatttatcaggtaacatcaaagcacctaaaaggagggagggaaacaaaaatggatgttttggttatggaaaatcttctctacagacgaaacattagacggctttatgacctcaaaggttcttcccgatcacggtacaatccagatacaagtgggagcaataaagtgctgctggatcaaaatctcattgaagctatgccaacctctccaatctttgttgggaacaaggcaaaaaggttgctagagagggctgtgtggaatgatactgccttccttgcatcaatatatgtgatggactactcattgctggttggcgtggatgaggaacagcatgaactggttttaggtatcattgattttatgaggcagtatacatgggataaacaccttgaaacttgggtgaagacttcaggcatcctaggaggacccaagaatacctctccaactgttatttcaccaacgcagtacaagaagcggtttaggaaggccatgagtttatattttctcatggtgccagatcaatggtcccctcaagagttacaccccagtgggtcccaatctgacatttgtgaagaaaatgcattgatgtga 5451 0.0 MGTPDKKISDFVDIVRSWIPRRTEPPNVSRDFWMPDQSCRVCYECDSQFTIFNRRHHCRICGRVFCAKCTANSVPVPSDEPNTGREDWERIRVCNYCFKQWEQITTVDNNGSADPSATPCLSPSPSTTSLVSTKSSCTCHSSSSTAGSVPYTTGPYQRVPYSPRHSSQMNHITDEQENLNSGRSTNSSEAVGNLTSNQFGYCFNRSDDEEDDYGVYHSDTESRHYSHAHDYDDPVNIHGVDHVYGPHQIHPDEDNIQEKSFSCLTAPENLHLEGVGGIQASEKEADEHDHADGCETSPYHEESNNAEPVDFESNVLLWLPPEPEDEEDDREAVLFDDDEDDGTTGGGEWGYLRSSTSFGSGECRTRDKTSEDHRKAMKTVVEGHFRALVAQLLQVESLTICDEDGKESWLDIITALSWEAATLLKPDMSRGGGMDPGGYVKIKCIACGHRSESMVVKGVVCKKNVAHRRMTSKIDKPRFLILGGALEYQRVSNQLSSVDTLLQQEMDHLKMAVARIDAHHPNVLLVEKSVSRYAQEYLLAKDISLVLNIKKPLLERIARCTGAQIVPSIDHLTSQKLGYCETFHVDKYFEEHGSAGQGGKKLTKTLMFFEGCPKPLGCTILLKGANGDELKKVKHVIQYGVFAAYHLALETSFLADEGASPLEFPLKSPITVALPDKPSSIVRSISTIPGFSVLTPRESQGAKPLKEVAKSNDIYNTEKAPSSFSESTERSLVSDSIHMHEVSGEVTLSAQDMPSFHRSSFLSNSASKEDDKKFPNEFFQYRPDEKRETMLNNDLMPDSFGTFEFSQQDGNSLLRAAALSANQGANLEPPYVKHDTNDNNNNNDHGDMIHSKEDFPPSTSDHQSILVFLSTRCVWKGTVCERSHLVRIKYYGSSDKPLGRFLRDQLLDQSYTCCSCELPSEAHVHCYTHRQGSLTISVKKLSESPLPGEREGKIWMWHRCLKCPRVNGFPPATRRVIMSDAAWGLSFGKFLELSFSNHAAASRVASCGHSLHRDCLRFYGFGKMVACFRYASIHLHSVYLPPPKLEFNYDRQDWIQKEANELQKKADMLFSEVRNGLHQISEKVSGPLLQEGGNRVTDFRNLLAELKGLLQCENEEFEDSFKKLLHKESKPGQPVIDILELNKLRRHILIHSYVWDQRLIYASNLSKIILQENSKSLNHREKLLGSREKVIEADVATRTARGHSSCDSFLLEIKPEGNLHLETSSHISHPVVKSEDKGKDTNHDKVDLSLSSGANINDKSESVEIGGAVRRALSEGESPVVANLSDTLDAAWTGESYPTNSSLKENGCLPPDAAAVACHSPGANIVTSKSSSDFYTSDMGGIEAGCTNYAKLLSKGLDTKWKGMPFANFFGSFNKSSSFNTQKLVEYSPIHILSFRELERQTGARLLLPAGANDTIVPVYDDEPTSVIAYVLVSMDYHMQMSEYDRPKDSGDSSISLPLFDSTSLLSLNSFDETITNTYRSLGSFDENMLSTSGSRSLSVGDPLSYTKDLHARVSFTDDSFLGKVKYTVTCYYAKRFEALRRTCCPSELDFVRSLSRCKKWGAQGGKSNVFFAKTLDDRFIIKQVTKTELESFTKFAPAYFKYLSESISTGSPTCLAKILGIYQVTSKHLKGGRETKMDVLVMENLLYRRNIRRLYDLKGSSRSRYNPDTSGSNKVLLDQNLIEAMPTSPIFVGNKAKRLLERAVWNDTAFLASIYVMDYSLLVGVDEEQHELVLGIIDFMRQYTWDKHLETWVKTSGILGGPKNTSPTVISPTQYKKRFRKAMSLYFLMVPDQWSPQELHPSGSQSDICEENALM 1816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g03495 1816 MobiDBLite consensus disorder prediction 283 307 - -
Pste6g03495 1816 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 22 1798 - -
Pste6g03495 1816 MobiDBLite consensus disorder prediction 1229 1246 - -
Pste6g03495 1816 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase isoform X1 451 624 - -
Pste6g03495 1816 CDD Fab1_TCP 386 658 - -
Pste6g03495 1816 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1564 1730 IPR002498 GO:0016307|GO:0046488
Pste6g03495 1816 MobiDBLite consensus disorder prediction 138 168 - -
Pste6g03495 1816 MobiDBLite consensus disorder prediction 1222 1253 - -
Pste6g03495 1816 Gene3D GroEL 451 624 IPR027409 -
Pste6g03495 1816 FunFam 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B 24 109 - -
Pste6g03495 1816 FunFam 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B 1490 1645 - -
Pste6g03495 1816 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1501 1645 IPR027484 -
Pste6g03495 1816 MobiDBLite consensus disorder prediction 336 371 - -
Pste6g03495 1816 SMART fyve_4 28 103 IPR000306 GO:0046872
Pste6g03495 1816 MobiDBLite consensus disorder prediction 283 297 - -
Pste6g03495 1816 SUPERFAMILY GroEL apical domain-like 452 624 IPR027409 -
Pste6g03495 1816 ProSiteProfiles Zinc finger FYVE/FYVE-related type profile. 36 102 IPR017455 -
Pste6g03495 1816 MobiDBLite consensus disorder prediction 138 152 - -
Pste6g03495 1816 Pfam TCP-1/cpn60 chaperonin family 405 652 IPR002423 GO:0005524
Pste6g03495 1816 CDD PIPKc_PIKfyve 1525 1788 IPR044769 GO:0000285
Pste6g03495 1816 SUPERFAMILY SAICAR synthase-like 1523 1788 - -
Pste6g03495 1816 MobiDBLite consensus disorder prediction 826 857 - -
Pste6g03495 1816 SUPERFAMILY FYVE/PHD zinc finger 31 105 IPR011011 -
Pste6g03495 1816 Pfam FYVE zinc finger 33 101 IPR000306 GO:0046872
Pste6g03495 1816 MobiDBLite consensus disorder prediction 838 857 - -
Pste6g03495 1816 Gene3D - 1647 1789 - -
Pste6g03495 1816 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 25 115 IPR013083 -
Pste6g03495 1816 MobiDBLite consensus disorder prediction 349 363 - -
Pste6g03495 1816 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1463 1788 IPR002498 GO:0016307|GO:0046488
Pste6g03495 1816 SMART PIPK_2 1498 1789 IPR002498 GO:0016307|GO:0046488
Pste6g03495 1816 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase FAB1 1647 1789 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g03495 Pste-Chr6 23631880 23649642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g03495 1 1814 EF-hand Containing Proteins AT3G14270 57.489 0.0 1951
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g03495 6 23631880 23649642 Pste6g03495 6 23631880 23649642 ECH
Pste6g03495 6 23631880 23649642 Pste3g04136 3 36839336 36847166 PCT