Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02816 atgtattcctcaaatacctccctcaacggcaatgacctaatctcgtaccctaaccaaccattttgctttaggcctttttcctttgaaagcaacccaactaattgctcaaaagaacaaagcaattccaattacgccctccctcctcctcctttgtcctttttccaatctccctttgacgaaaatatcttcctagaacaccaccatgacttgctcttacttcatcaatctctagctgacccggccgaaatttcgccaattccttgccccggacaagttgccatcgcgatggaccacactccaagaaagagatccaacaagagagaccgccacagtaagatcaacaccgcacgaggcctcagggatcgaagaatgaggttgtccctcgaagttgctaagaggtttttcggtttgcaagacatgctgggctttgacaaggccagcaaaaccgttgagtggctactaaaccaagcaaaggttgaaatcaaacaacttgcaagggaaaaaaccagcgttggtggcgccaagagtgcatcatcaacttcggaatgcgaaggggtgtctagcttggacgaggttgtcgttagtggagtaaacgaggaaccagagagggagacaccgcacatgaagagaagaacaactaaggtttgtagaaagattgcattcaatcctattgataaggaatcgagggaaaaggcaagagaaagggcgcgagaaagaacacgagagaagatgagaagtcgacgagtacttgttgatccatcaaacttgaaccgtatgagttcttggaacccctttgatacggttgaagactctgcgggtactcagagccaaagcgtgaatcgtccctccatgaatgtgcaccttgctgaggctgaagaacctagttctcacgcgaaggagtatttgggagaggacatgccgcatgaagatacttctttgcccatcttgaacaagtggagcccaactatgatgttcaataactcaggaatccttcacgaacatcaatttgcagaatttcagtccttgggaaagccttgggaagcctacaacaatcacatccaatatttgtgttcataa 1077 0.0 MYSSNTSLNGNDLISYPNQPFCFRPFSFESNPTNCSKEQSNSNYALPPPPLSFFQSPFDENIFLEHHHDLLLLHQSLADPAEISPIPCPGQVAIAMDHTPRKRSNKRDRHSKINTARGLRDRRMRLSLEVAKRFFGLQDMLGFDKASKTVEWLLNQAKVEIKQLAREKTSVGGAKSASSTSECEGVSSLDEVVVSGVNEEPERETPHMKRRTTKVCRKIAFNPIDKESREKARERARERTREKMRSRRVLVDPSNLNRMSSWNPFDTVEDSAGTQSQSVNRPSMNVHLAEAEEPSSHAKEYLGEDMPHEDTSLPILNKWSPTMMFNNSGILHEHQFAEFQSLGKPWEAYNNHIQYLCS 358
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02816 358 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 91 351 IPR005333 GO:0003700
Pste6g02816 358 ProSiteProfiles R domain profile. 226 243 IPR017888 -
Pste6g02816 358 Pfam TCP family transcription factor 105 246 IPR017887 -
Pste6g02816 358 ProSiteProfiles TCP domain profile. 106 164 IPR017887 -
Pste6g02816 358 MobiDBLite consensus disorder prediction 226 246 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pste6g02816 Pste-Chr6 15805435 15810745 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02816 102 240 TCP Transcription Factor Family AT3G18550 42.105 1.38e-27 110
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pste6g02816 TCP 6.5e-45 No_clan
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00470 5 3060632 3062426 Pste6g02816 6 15805435 15810745 ECH
Pste2g00304 2 2225469 2226593 Pste6g02816 6 15805435 15810745 ECH
Pste6g02816 6 15805435 15810745 Pste6g02816 6 15805435 15810745 ECH