Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02757 atggcacaagatactgtttctggtgctgactcgcctcggcgacgtctattacgagaccaagttcaagtggtgaaaaggaaggattctgatcgctatgaaattgttcctatccaagattctctgtcatttgagaaaggattcttcatatttattcgtgcctgccagttgttggctcaaaagaatgatggaatcatattagtaggagttgctggtccatctggagcagggaaaactgttttcactgagaaggtcctcaattttatgccaagcatagctgtcataacaatggacaattataatgattctagtagaattattgatggaaactttgatgaccctcggttgacggattatgataccttgctcgaaaatatacagggtcttaaagcagggaagcctgttcaagttccaatatacgatttcaagtctagttctcgcataggttacaggactgttgaagtccctagctctggtattgtaatcatagaaggcatctatgccttaagtgaaaaattaaggcctttgcttgatcttcgtgtttctgttactggtggagttcattttgaccttgtcaagcgtgttctgcgggacattcatcgtgctggtcaagagcctgaagaaataattcaccaaatctctgaaacggtataccctatgtataaagcttttattgagccagatctccaaactgcacatataaaaattattaacaagtttaatccattctctggattccagaatcccacctacatattgaagtcagcaagagccgtgacagttgatcaaatcaaggcagttattgctgctcagcatactgaaaccaaagaagaaacatatgacatatttcttctaccccctggtgaagaccctgaggcttgtcaatcatatttgagaatgagaaaccgtgatggaaagtacaatctcatgtttgaggaatgggtgacagatagtccattcataatatcacctagaattacttttgaggtcagtgtccgccttctaggagggctgatggccttgggatacacaattgcagctatcctgaaaagaagcagccatgtcttccatgatgataaagtgaccataaaaactgatcggctagaacaactttatcgcacatatgttcaggtgcaagggaaagacagaaactattgcaaatttgttgcagagaaactggggttggatggttcctatgttcctcgcacttacattgaacaaattcagctagaaaaacttgtaaacgatgtgatggcattgccagacgatcttaagacaaaacttagcttagatgatgacttagtttcaagccccaaagaagccctttccagagcttctgcagataggagaatgaagtatcttaatcgtggtatttcacactcatattcaactcaaagggacaagattttacctaagctgactaaacttgctataaataacagaagattcgatggaagagttctagaatcacctgcaccaattgctaatcatggaatcatcactcaactttctgatcaaatttccacattaaatgaaagaatggatgaattcacctcccgtattgaagagctgaattcaaagtttgctatcagaaaagattcagcagccagtcaacaaaacttggccttacaggctgatgcctgcaatggctcaggccccagttccttctttgtaactggactaaccaatgggtcattgactggatcattgctacctaattcttcatcatcttctcaattggctaaagagtctcccctgatggaagaggtattagttattgcacgaggacaacgtcaaataatgcatcagctagatactctgagcaatcttttgcatgaatacttcggagaaaggtcacgcctgggaagacaggaccagacgggtagaatgcgggaagttgaatcggttgtcatccctgtggttctgactctggccattggtgcttttggtgtgtttttgtttagaggtttggcatcccaaaaataa 1983 0.0 MAQDTVSGADSPRRRLLRDQVQVVKRKDSDRYEIVPIQDSLSFEKGFFIFIRACQLLAQKNDGIILVGVAGPSGAGKTVFTEKVLNFMPSIAVITMDNYNDSSRIIDGNFDDPRLTDYDTLLENIQGLKAGKPVQVPIYDFKSSSRIGYRTVEVPSSGIVIIEGIYALSEKLRPLLDLRVSVTGGVHFDLVKRVLRDIHRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNPFSGFQNPTYILKSARAVTVDQIKAVIAAQHTETKEETYDIFLLPPGEDPEACQSYLRMRNRDGKYNLMFEEWVTDSPFIISPRITFEVSVRLLGGLMALGYTIAAILKRSSHVFHDDKVTIKTDRLEQLYRTYVQVQGKDRNYCKFVAEKLGLDGSYVPRTYIEQIQLEKLVNDVMALPDDLKTKLSLDDDLVSSPKEALSRASADRRMKYLNRGISHSYSTQRDKILPKLTKLAINNRRFDGRVLESPAPIANHGIITQLSDQISTLNERMDEFTSRIEELNSKFAIRKDSAASQQNLALQADACNGSGPSSFFVTGLTNGSLTGSLLPNSSSSSQLAKESPLMEEVLVIARGQRQIMHQLDTLSNLLHEYFGERSRLGRQDQTGRMREVESVVIPVVLTLAIGAFGVFLFRGLASQK 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02757 660 CDD UMPK_like 66 238 - -
Pste6g02757 660 Pfam CYTH domain 269 403 IPR023577 -
Pste6g02757 660 PRINTS Uridine kinase signature 187 197 - -
Pste6g02757 660 PRINTS Uridine kinase signature 223 236 - -
Pste6g02757 660 PRINTS Uridine kinase signature 64 81 - -
Pste6g02757 660 PRINTS Uridine kinase signature 131 146 - -
Pste6g02757 660 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 235 IPR027417 -
Pste6g02757 660 Pfam Phosphoribulokinase / Uridine kinase family 67 235 IPR006083 GO:0005524|GO:0016301
Pste6g02757 660 PANTHER URIDINE KINASE 17 422 - -
Pste6g02757 660 Gene3D - 253 407 - -
Pste6g02757 660 ProSiteProfiles CYTH domain profile. 247 409 IPR023577 -
Pste6g02757 660 SUPERFAMILY CYTH-like phosphatases 259 406 IPR033469 -
Pste6g02757 660 Coils Coil 499 526 - -
Pste6g02757 660 Gene3D - 65 245 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02757 Pste-Chr6 15263599 15274625 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02757 66 320 PRT Gene Family AT5G40870 25.758 1.85e-18 87.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02757 6 15263599 15274625 Pste6g02757 6 15263599 15274625 ECH
Pste3g04118 3 36408810 36429289 Pste6g02757 6 15263599 15274625 PCT