Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste6g02276 ATGGCTGATGATGAAGCTTCTGGAGACGTTGATCTAAGGTTGGGAGAGCCCAAGGGGCCCAAAGAGGAGCCCCAGACGGAGGAAGGGTCCGCGATACGTGTGATGCCCGTGGCGGTTCACGTCCCCATGTCCATGTCCATGTCCATGTCCAAGGCCCTGGCCCAAGCCCAGGCCCAGGCCCAACCACAAAAACGCGCCTCCACCAAAGATCGTCACACCAAGGTAGAAGGTCGAGGCAGGAGGATCCGAATGCCCGCCACGTGTGCGGCGCGGATCTTCCAACTGACCCGCGAACTCGGCCACAAGTCCGACGGCGAAACCATACGGTGGCTCCTGGAGCACGCCGAGCCCGCCATCATCGCCGCCACCGGCACTGGCACCGTACCCGCCATCGCGATGTCCGTTAACGGTACGCTCAAGATTCCGACCACCTCGCCGTCGGACCCGGAACCTGGAGACCCGCCAGAGAGAAAAAAGCGCAAACGACCAGCAAACAGCGCTTACGTGGATATAAACGACGCCGTTTCGGTCTCGGCCGGGCTCGCCAGCTCTAATAACCAAAACGCAGCAACTACGACCACAACAACGACGACAATTCCGCAACACAACGCAATTCCGTTACCTCAAGGCATGGTTCCCGTGTGGGCCATACCTTCAAACGCCGTCGTTCCCGCTGCAGGCGCCTTTTTTGTTCTCCCTCACACGGCGTCGTTTCAGCACCAACCTCAATTTTTCACGCTTGCGCGACCTATCTCTGCGTTTGTTTCCTCCATGGTCACCCCAGTTCAACTCCAACCAACCTCGATCACCTCTTCCACCAACATCAACTCTACCTCCACCGCGCCGTCGTCGAAATCTCCGGCCAGAGCCACCGTCATGGCTCCTACCACCACCACAACCGCGATGCTGAGAGATTTCTCCTTGGAGATTTACGACAAGCAAGAGCTGCAATTCATGTCGCGCGCCTCTTCCAAGCATTGA 981 0.5841 MADDEASGDVDLRLGEPKGPKEEPQTEEGSAIRVMPVAVHVPMSMSMSMSKALAQAQAQAQPQKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTTSPSDPEPGDPPERKKRKRPANSAYVDINDAVSVSAGLASSNNQNAATTTTTTTTIPQHNAIPLPQGMVPVWAIPSNAVVPAAGAFFVLPHTASFQHQPQFFTLARPISAFVSSMVTPVQLQPTSITSSTNINSTSTAPSSKSPARATVMAPTTTTTAMLRDFSLEIYDKQELQFMSRASSKH 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste6g02276 326 ProSiteProfiles TCP domain profile. 68 122 IPR017887 -
Pste6g02276 326 MobiDBLite consensus disorder prediction 139 166 - -
Pste6g02276 326 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 28 288 IPR005333 GO:0003700
Pste6g02276 326 Pfam TCP family transcription factor 67 179 IPR017887 -
Pste6g02276 326 MobiDBLite consensus disorder prediction 269 291 - -
Pste6g02276 326 MobiDBLite consensus disorder prediction 53 78 - -
Pste6g02276 326 MobiDBLite consensus disorder prediction 1 28 - -
Pste6g02276 326 MobiDBLite consensus disorder prediction 151 166 - -
Pste6g02276 326 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste6g02276 Pste-Chr6 10901874 10902854 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste6g02276 48 325 TCP Transcription Factor Family AT2G45680 55.016 2.77e-94 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pste6g02276 TCP 5.7e-30 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste6g02276 6 10901874 10902854 Pste6g02276 6 10901874 10902854 ECH