Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00658 ATGGCCTTGCAAACAGCTACTCCTCCGACTACTCCCAGTGCCCAAGTTGTTGGTAATGCATTTGTTGAGCAGTATTACCATATTCTTCATCATTCACCGGATTTGGTTTATCGGTTTTACCAGGACTCTAGTGTGATAAGCCGTCCTGATTCCAATGGAATGATGACATCAGTTACAACCATGAAAGGCATTAACGAGAAGATTCTTTCACTAAATTTCAAGGAATTTAAAGCAGAGATAAAGACTGCAGATGCTCAGAAATCCTACAAGGAAGGAGTGACTGTGCTGGTGACTGGCTGCTTGACTGGCAAGGATAGCATGAGAAGAAAATTTGCCCAGTCATTCTTTCTTGCTCCACAGGACAATGGTTATTTTGTTCTGAATGATGTTTTTAGGTACGTAGAAGATCATGAACCATCACAACTGCCTCCGGTTAATGGAGATGGTGATGCAGCTGCTGCTACAGTAACCCCAGAACCAGAACCCAGCCATGTTGCTGATTCTTCTGCACCAGATCCTGCAGATTCTCTTGTGAACAAGGGTCAAATTGTTGCTGAGAATGCTTATGAGCCATCTAATCATCACGAGAGACCGATACCAGCTGAAAATGAAGACAATGTAGAACCACATTTTCAGTCAAATGGGCCTAACAAAACTGAGAGCCAGGCTGTTGAGTCAGTAGATTCTACTGAAGTGCCTGAAGTAGCTTTGGATAGTGTTAACAACCCTGAAAGTAGTGATGCTCATGACGAAGTTGAGGGACACTCCATTTACATTCGAAATTTGCCTTTAAATGTGACGGTTGCACAGTTGGAAATGGAGTTTAAGAAATTTGGACCCATCAAGCCAGGAGGCATCCAAGTCAGAAACAATAAGCAGCAGGGATACTGTTTTGGCTTTGTTGAATTCCTATCTGTAAATTCAATGAACAGTGCAATTCAGACAGACAACCTTGTTGACCTTGCTGATGACATCAAGTTGGGGGGACTAGAAAGCGTGATTTATCTTTGCAACACTCACCTCCTTGATAGGCCTCTTCTTCAAAAGATAGGCCAGCTACCTAGGGACAGCCTTACCAAATGGGCAACCCTTTCCTCTAAATTATCTCCTATTGTGGCAGTGGCTTCTCATGAATTTCAACTCCGTGCCTCCCTCGTTGTAGAAGCAATGTCCAAATTGAGTGGTGGAGAAGAAATGCATAAAGACTTACTCTTGGCTTCACCTATTCCTATTGGGGGACGTCAAGCTGTAGTTGAGATAAAGAGAACCACCACGCGAGTTGGCAGTGGAATTAGCAGTACTGGAAGACCTAGGATGGCAGTGGGTAGAGGTGGGCTACGAATTGATTCTTTCAGGGGCCGTGGCAGTTGGGGATATGGGCGAAATGATTATGGAAGCCGCAGCGACTTTTCTGGTAGTGGTAGTGGTAGTGGTAGTGGTAGTGGTAGAGGTCGTGGTTATGGAGAAGGTTATCACCAAGGGAGAGGGAGAGGTGGCCGCTCAAGTGGACAAAAACAAAATGAAGTTTCCAACTGA 1536 0.446 MALQTATPPTTPSAQVVGNAFVEQYYHILHHSPDLVYRFYQDSSVISRPDSNGMMTSVTTMKGINEKILSLNFKEFKAEIKTADAQKSYKEGVTVLVTGCLTGKDSMRRKFAQSFFLAPQDNGYFVLNDVFRYVEDHEPSQLPPVNGDGDAAAATVTPEPEPSHVADSSAPDPADSLVNKGQIVAENAYEPSNHHERPIPAENEDNVEPHFQSNGPNKTESQAVESVDSTEVPEVALDSVNNPESSDAHDEVEGHSIYIRNLPLNVTVAQLEMEFKKFGPIKPGGIQVRNNKQQGYCFGFVEFLSVNSMNSAIQTDNLVDLADDIKLGGLESVIYLCNTHLLDRPLLQKIGQLPRDSLTKWATLSSKLSPIVAVASHEFQLRASLVVEAMSKLSGGEEMHKDLLLASPIPIGGRQAVVEIKRTTTRVGSGISSTGRPRMAVGRGGLRIDSFRGRGSWGYGRNDYGSRSDFSGSGSGSGSGSGRGRGYGEGYHQGRGRGGRSSGQKQNEVSN 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00658 511 MobiDBLite consensus disorder prediction 190 204 - -
Pste5g00658 511 Gene3D - 6 138 - -
Pste5g00658 511 FunFam Nuclear transport factor 2 family protein 8 137 - -
Pste5g00658 511 PANTHER RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN 13 504 IPR039539 -
Pste5g00658 511 CDD RRM_SF 257 317 - -
Pste5g00658 511 ProSiteProfiles Nuclear transport factor 2 domain profile. 17 133 IPR018222 -
Pste5g00658 511 SMART rrm1_1 256 328 IPR000504 GO:0003723
Pste5g00658 511 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 255 339 IPR000504 GO:0003723
Pste5g00658 511 SUPERFAMILY NTF2-like 13 134 IPR032710 -
Pste5g00658 511 MobiDBLite consensus disorder prediction 462 511 - -
Pste5g00658 511 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 257 314 IPR000504 GO:0003723
Pste5g00658 511 MobiDBLite consensus disorder prediction 138 176 - -
Pste5g00658 511 MobiDBLite consensus disorder prediction 190 228 - -
Pste5g00658 511 MobiDBLite consensus disorder prediction 207 228 - -
Pste5g00658 511 Gene3D - 186 332 IPR012677 -
Pste5g00658 511 SUPERFAMILY RNA-binding domain, RBD 210 315 IPR035979 GO:0003676
Pste5g00658 511 CDD NTF2 13 135 IPR018222 -
Pste5g00658 511 MobiDBLite consensus disorder prediction 466 480 - -
Pste5g00658 511 Pfam Nuclear transport factor 2 (NTF2) domain 17 133 IPR002075 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00658 Pste-Chr5 4263381 4282100 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00658 5 4263381 4282100 Pste5g00658 5 4263381 4282100 ECH