Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00470 GTGTCTCTCTCTACAGTTCCCATCCCATCCCTTTGGTAATTGGTACCAACGAGAGCTTATGGAGCTGCTATATTCGCAGTATAATGGAAACTGCGCTTTGCAAACCACGGTTCCATCTTTCGCCTAAACCTATCATCCTTTTCTACACTATATTCATTAATTTAGCAAACATTTAAAACATAGTAAAAAAAGGTGTATGCGAATTATATAGATAAGAAACCTCTTCCTGCGTTTAGTGTGGTCCTCATCATTCCACAGAAATTGTCTAGGGTTTCTGTCCATTGGAAATTGCAAAATCGATCTCAATATGTAAAATGTTTCCTTCCACTAATTACACATCCTCAGGCTCTTACCCTCGGTTCCCTTCTTCATCTTCCTCTTCTACTTCACCATACCCTTCTTTTACTTTCCTTCACCCTGAAAACACTTCTTCCAGCAACACCTTTCTTCATGACCCACTTGCTCTTTCCTACATACCCTCTCATTACCATGCTCCAATCCCAGAAACACTAGCCACTTGGACAGTTGCAGATTGTGCTGCTGCAGCAATGCTCAACCAGGATCTCGGTGGTGCCCTTTATGGCCTCACCAAGAAACCAGTGAAGAAAGCAACCAAGAAAGACAGGCACAGCAAAATTCACACCTCTCAGGGATTGAGGGACAGAAGGGTGAGATTGTCCATTGAGATCGCACGCAAGTTCTTTGATCTTCAAGACATGTTAGGGTTTGACAAAGCCAGCAACACCCTTGACTGGCTCTTCACAAAGTCCAAGAAGGCAATTAAGGAGCTTACTCGAACTAAGCACAGTGCTGACAGCTTAGAATTCTCCCCTTCTTCAGAGGGTGAAGTGGTTTCTATGATCCACCAAGACCAACAACAAGAAGGGGAAATTTTGGAAGAAGGGAAGTCGAAACAACCTGCTTATTGTGTTAAAGCAAAGGTGAAGGAATCTAGGGAAAAAGCAAGGGCAAGAGCAAGGGAAAGGACTAGTAGCAAGATATTGTGCAGTGATGAAGGGAAGGTGCAAGGGTTGAAGAAAAAGTGCCCTGTAAGTGAAAACCCTCAAATCCTGGACCAGTTAAGGTCACCCCTTCAACCTCATCCTCAAGATATGGGTGGAGGAGTGCCTAGAGATTATGACTTCAACGTTGTTGAGGAATCCATTGTCATCAAGAGAAAGTTGAAACAAACTTCCGCTCATCACCAAAACACTGTGATCCCTAAGGAAGCAAGTGCAAACAACAGTGACTACCACCCTTTCCCCAATTTGTCTCCAAATTGGGAAGCTAATAATGGTGCCACTGGACGCTCCACTTTTTATGCAATAGCCAGCATGAATCTATCTACAGGGCTTCAAATTTTTGGAAAATCTTGGGAGGAGTGCACCAATCCTAATCCAAGCTAATATGTTAGTTTTCAGTATTATCCGATGATTGTCTCTAGTATTTTACCAAGGAATATCATGGTCGTGGAAGCATCCTTCTGTGTTTTTCTACTAGTAACTTTTTCTGTCCTATATTTCCTTTCTACAATGTACTGATTTTTTTTGCTCTATATCAGCCAAAGGACATGGGACAGTTGGCAAAAAAGGGCGCTGCTGCGTGTATAATTACTGACCAATATTAAGTGTGGCTGATAATACATCCGGTCAATATTTATATTTATCAAGAACCATCCTTTTTTGCTAGCAG 1692 0.422 MFPSTNYTSSGSYPRFPSSSSSSTSPYPSFTFLHPENTSSSNTFLHDPLALSYIPSHYHAPIPETLATWTVADCAAAAMLNQDLGGALYGLTKKPVKKATKKDRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLDWLFTKSKKAIKELTRTKHSADSLEFSPSSEGEVVSMIHQDQQQEGEILEEGKSKQPAYCVKAKVKESREKARARARERTSSKILCSDEGKVQGLKKKCPVSENPQILDQLRSPLQPHPQDMGGGVPRDYDFNVVEESIVIKRKLKQTSAHHQNTVIPKEASANNSDYHPFPNLSPNWEANNGATGRSTFYAIASMNLSTGLQIFGKSWEECTNPNPS 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00470 363 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 93 327 IPR005333 GO:0003700
Pste5g00470 363 ProSiteProfiles TCP domain profile. 101 159 IPR017887 -
Pste5g00470 363 Pfam TCP family transcription factor 100 228 IPR017887 -
Pste5g00470 363 MobiDBLite consensus disorder prediction 1 22 - -
Pste5g00470 363 ProSiteProfiles R domain profile. 211 228 IPR017888 -
Pste5g00470 363 MobiDBLite consensus disorder prediction 296 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00470 Pste-Chr5 3060632 3062426 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste5g00470 44 225 TCP Transcription Factor Family AT1G67260 39.901 1.63e-34 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pste5g00470 TCP 4.9e-42 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00470 5 3060632 3062426 Pste6g02816 6 15805435 15810745 ECH
Pste5g00470 5 3060632 3062426 Pste5g00470 5 3060632 3062426 ECH
Pste2g00304 2 2225469 2226593 Pste5g00470 5 3060632 3062426 ECH