Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste5g00248 ATGAAAACCAAAACAGCCCAAGCCTTTAGTGAAACGGTGCGTAAAGCCTTCTCCTCTTTTCCGAACAAAAACACTGTTTCAGAGCAGCAACAAGGACTGGGATTGCGCTTCAGAGGAAGAAGAGATCTCGCTTTGATTCACACCTCAAGAATTTCGCATGTCTTGGAAATGGGTGAACAATGTCATTCACATGCTCCATTAGAAATTAACTTCAGTGAAAGTGAGGAAAACTTGATCTCTCATTCACCAGAAGAATGTAAGCTTGAAACTGATAGTTTCGATGGAATTGATGCATGTCCTGTGCCACAGCGTGGAATGGTATTTAGTTCAGAGGCAGAGGCGAGATTGTATTACACAAAATATGCCACCCAAATGGGCTTCCGTGTCATGACTAGAACCTCCAAAAAGGGACGTGATGGCAAAGTTAAATATTTAATACTTGTATGTTCTGAAATAACAAGAAATGCTTCTGATGCAGCAAGGAAACAGTATTGTGCGGCTAGGATCAATTTGACTTTACGTAAAGATGGAACATACCGAATTAACGCAGTTACACTTGGTCATAGTCATGAGTTGGGTTCACATCATCTACTCCCAAGTGATATTGACATGAGGGGTAAAAGGACGTTGGATTCGGAAGTTATTGACATGGGAGTTAAGAAGATATCAGACAAAAATGAATACAGAAACTACCTTCAGCAAGAAAGACATTTGATTGGGGAAAATGGAGATGGTGAAGCCCTTCAGAGGTATTTGGTGAGAATGCAAGAACAGGACAGAAACTTCTTCTATGCAATTGATTTGGATGATTTCTTCTGTGTGAGGAATGTCTTTTGGGCTGATGGAAGGAGCAGAGCTGCATATGAATCGTTTGGTGATGTGGTGACAGTTGATACTACATGTCTTTCTAATTGCTACAAGGTGCCACTTGTAACTTTTGTTGGAGTTAACCATCATGGGCAATCTGTATTGTTCGGTTGTGGTTTGTTATCATGCGAAGACTCAGAGGCGTTTGCTTGGCTGTTTGAATCATTGTTGCATTGCATGTCCGGTGTACCCCCGCAAGGAATCTTAACAGATCATTGCTGCAAGGCCATGCAGAAAGCAGTTGAAACTGTATATCCCTCTACTCGACATCGGTGGTGTTTATCAAATATAATGGAAAAACTTCCCCAAATAATCGATGGATATGCTAATAACAAGTCCTTAAGAGATCGTTTGCAGAATGTTGTATATGACACACCTACAACAAATGAATTTGAGGGGAAATGGAAGAAGATTATGGAGGATTTTGACCTCAAGGACAACAAATGGTTGAAGGAGTTGTTCCTTGAGCGACATCGCTGGGCTCCTTCCTTTGTAAGAGGTGAGTTTTGGGCTGGAATGTCCATTAATCCGCATAGTGAAAACATGCATGCATTTTTTGATGGATATGTAAATCGGCAAACAACTTTGAAACAATTTGTTGATCAATATGATAATGCTTTGCAATACAAGACTGAGAAGGAGTATATAGCTGACATACATTCATCAAGTAATACTCAAGCTTGTGTTACCCAATCTCTTATTGAGAGGCAGTTTCAATCTGCATACACTCATGCCAAATTTCTAGAGGTTCAACATGAATTTGTTGGAAAGGCTGATTGTAATGTTTCTGTTGGCAATGGTGATGGTTCTATTTGTCACTATAATGTTATTGAGGATGTGATAATAGAGGATAAGCCTAAGGAATCCGTGGTTAAAGTCACATATAACAGGGTTGACTGTGATGTAAAATGCAATTGCCAATTGTTTGAGTTCAAAGGTATACTTTGTAGGCACTCGCTTGCTGTACTGTCACAAGAGAGAGTGAAGGAAGTCCCCTGTAAATTTATTTTGGACAGGTGGAGGAAAAATATTAGGAGGAAGTATGCTTATATCAAAACAAGCTATGGTGTCCAGCATTTTCAACCTCATGTGCAGAGGTTTGAAGTGTTATGCAATCAATTCAATAGTATTGCTGTTGCTGCCTCTGAATTTGAGGACACAAGTGCTTTTGTAAAGGATACCCTGTATAACTTAAAGGAGAAACTTGAAGCATGGACAACGTTATTGAGAAACTCAACTCATGTGAATGTAGAGAAATGCAATAATATGATAGACTGGAAATAA 2151 0.3952 MKTKTAQAFSETVRKAFSSFPNKNTVSEQQQGLGLRFRGRRDLALIHTSRISHVLEMGEQCHSHAPLEINFSESEENLISHSPEECKLETDSFDGIDACPVPQRGMVFSSEAEARLYYTKYATQMGFRVMTRTSKKGRDGKVKYLILVCSEITRNASDAARKQYCAARINLTLRKDGTYRINAVTLGHSHELGSHHLLPSDIDMRGKRTLDSEVIDMGVKKISDKNEYRNYLQQERHLIGENGDGEALQRYLVRMQEQDRNFFYAIDLDDFFCVRNVFWADGRSRAAYESFGDVVTVDTTCLSNCYKVPLVTFVGVNHHGQSVLFGCGLLSCEDSEAFAWLFESLLHCMSGVPPQGILTDHCCKAMQKAVETVYPSTRHRWCLSNIMEKLPQIIDGYANNKSLRDRLQNVVYDTPTTNEFEGKWKKIMEDFDLKDNKWLKELFLERHRWAPSFVRGEFWAGMSINPHSENMHAFFDGYVNRQTTLKQFVDQYDNALQYKTEKEYIADIHSSSNTQACVTQSLIERQFQSAYTHAKFLEVQHEFVGKADCNVSVGNGDGSICHYNVIEDVIIEDKPKESVVKVTYNRVDCDVKCNCQLFEFKGILCRHSLAVLSQERVKEVPCKFILDRWRKNIRRKYAYIKTSYGVQHFQPHVQRFEVLCNQFNSIAVAASEFEDTSAFVKDTLYNLKEKLEAWTTLLRNSTHVNVEKCNNMIDWK 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste5g00248 716 Pfam SWIM zinc finger 590 613 IPR007527 GO:0008270
Pste5g00248 716 Pfam FAR1 DNA-binding domain 117 192 IPR004330 -
Pste5g00248 716 ProSiteProfiles Zinc finger SWIM-type profile. 578 616 IPR007527 GO:0008270
Pste5g00248 716 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 95 693 IPR031052 GO:0006355
Pste5g00248 716 SMART 26again6 591 618 IPR006564 GO:0008270
Pste5g00248 716 Pfam MULE transposase domain 294 388 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste5g00248 Pste-Chr5 1756567 1759264 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pste5g00248 MULE 1.8e-24 CL0219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste5g00248 5 1756567 1759264 Pste5g00248 5 1756567 1759264 ECH