Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03161 CGCCGCTAACGGTGGCTGGCACGGGTGCAGCGTGCACGTGTGTAGAAGGAAGAACAAGAATAACCTGGCGCATCCACCTACCGTGGCGTGTTGAGACTTGATAGTTGAGAGTTGAGAAGAGAAGAGTCCCATCTGGTGGATCAAATAAAATCACTATATGATATGGCTCTGTCGCGCCTTCGTCACCCTCTCTTCTCTCGCTCCCTTCGCATCCTATCTTCTCCCGCCAGATCCTTCTCTCGAACTTCTAATTCTACCATTTTCACCGTCGTAGGTCCTCACACTTTAAGGCCTGCATCTTGCTCTAGGCTGACTGGAATTCTTGATAGATCTTTGAAGTCAAAGTGGACTGATGTCAAATACTTGTCATCTTCAGATTCTTCACATGAGGTCCTTGGGATGCCTGCTTTATCTCCTACAATGACCCAAGGTAATATTGCAAAATGGAGGAAAAAAGAAGGAGAAAAGATAGAAGTGGGGGATGTACTATGTGAAATTGAAACTGACAAAGCTACACTAGAATTTGAAAGTCTTGAAGAGGGATTTCTGGCTAAGATATTGGTACCTGAAGGTTCAAAGGACGTGCCTGTTGGACAACCAATTGCAATAACAGTTGAGGATGCAAATGACATCCAAAATGTTCCTGCTTCTGTGGAAGGTGAGACCAAGGTTGAGGAGAGGAAACCAACACATCAGGATGTTACAGATAAGAGGAAACCGGAATCAACTTCTACTATGATTAATGCATCAGAACTTCCACCTCACATCCTTCTTGAAATGCCAGCTTTGTCTCCCACAATGAACCAAGGAAACATTGCTAAATGGAGGAAACAGGAAGGAGACAAGATTGAAGTGGGTGATATACTATGTGAGATAGAGACAGACAAAGCTACTCTTGAATTTGAAACTCTTGAAGAGGGGTACCTGGCTAAAATACTTGCTCCAGAAGGTTCAAAAGAAGTGGCAGTTGGACAGCCTATTGCAATAACAGTTGAAGATGCAAGTGATATTGAAGCTGTAAAGAATTCTGTTAGCAGCAGTTCTACAAAACAACAGAAGGCCTCCCAACGTGACACTAAAAGTGAGGTCAAATCTCAGAAAAACAATATAACACGAATCAGTCCAGCTGCAAAATTGCTAATTACAGAGTATGGATTGGATGTATCAACATTGAATGCAACTGGTCCCTACGGCACCCTGCTGAAAGGGGATGTTCTTTCTGCAATTAAGTCAGGCAAATTGTCTCCAAAACCTTCTTCATCTAAAGAAAAGGTGTCATCATCTCGAAGTCATCAACAAGTTGCAGCTTCCCGAGAGTCAAAATCTGATTTAAAGCAGTCAGATGCTTATGCAGATTTTCCTAATAGTCAAATTCGCAAGGTGATTGCCAAGAGATTATTGGAATCAAAACAAAATACGCCACACTTATATTTATCATCAGATGTCATACTGGATCCTCTTCTTTCCCTTCGAAAGGATCTTAAAGAGCAGTATGATGTTAAAGTTTCTGTGAATGACATTATTATCAAAGTTGTAGCTGCTTCCCTCAGAAATGTACCAGAGGCAAATGCATACTGGAATGACGAGAAGGGTGAGGTCATTTTAAATGATTCGATTGACATATCAATAGCAGTTGCCACTGAGAAGGGCTTGATGACTCCAATAATAAAAAATGCCGATCAGAAGACAATATCTGCTATCTCCTCAGAGGTCAAGGAACTAGCTACAAAGGCACGTGATGGTAAGTTGAAGCCACATGAATTCCAAGGGGGGACTTTTAGCATTTCAAACTTAGGAATGTTTCCCGTGGACAAATTTTGTGCTATTATAAACCCCCCTCAGGCTTGCATTCTTGCTGTAGGGAGAGGCAACAAAGTTGTTGAACCAGTAATTGCTGCTGATGGAATTGAGAAGCCATCCATTGCCAACAAGTTGAGCTTAACATTGTCAGCTGATCATCGTGTTTTCGATGGCAAAATTGGAGGTGCATTTCTCTCTGCTTTGCAATCAAACTTCAGTGATATAAGACGACTTCTTTTGTAATGACGCAAAACACATTTTCATGTTACTTGATTAGACTTCTTACGACCAATCACGTGGATCCACCACTACCTGGATCAAGCTTGCATAACATCCCCATTTTTGTCCTTTACACTTTTATCTCTTCATCTGAAACAGTTTTCGATTGTTGTGCCTCGTTAATTTTTGTATAATAATATCTTGGGTCTAATTACTACATATCCTGAGAAAATACCCGCCATGGTACGATCTAACATTAGGTTTCCAACAATTGAGATTCATGCATGTTGGAAATTTTGTTTATTAGGAGGCACTTTTCTTCTCCTCGATGTGTAATTTTGTATGAAGAGCTATGTATAGACTGCCATTCAAATACGGACATTTGGATGAATAAATATTCTTTACATGTGCTGCATATCTGTCATCCGACTCAAGTGATGACATGATTTGGCACAATGGTACTCTTGGTTTAGTGTTTCATCTATCAGCCTGTTCTGGCACTTTCTCCTCTGCATTTGACCTACGGGTTGGATTAATAATGGCCAGTTTGGCTAAATATTCCCATCATAA 2589 0.4094 MALSRLRHPLFSRSLRILSSPARSFSRTSNSTIFTVVGPHTLRPASCSRLTGILDRSLKSKWTDVKYLSSSDSSHEVLGMPALSPTMTQGNIAKWRKKEGEKIEVGDVLCEIETDKATLEFESLEEGFLAKILVPEGSKDVPVGQPIAITVEDANDIQNVPASVEGETKVEERKPTHQDVTDKRKPESTSTMINASELPPHILLEMPALSPTMNQGNIAKWRKQEGDKIEVGDILCEIETDKATLEFETLEEGYLAKILAPEGSKEVAVGQPIAITVEDASDIEAVKNSVSSSSTKQQKASQRDTKSEVKSQKNNITRISPAAKLLITEYGLDVSTLNATGPYGTLLKGDVLSAIKSGKLSPKPSSSKEKVSSSRSHQQVAASRESKSDLKQSDAYADFPNSQIRKVIAKRLLESKQNTPHLYLSSDVILDPLLSLRKDLKEQYDVKVSVNDIIIKVVAASLRNVPEANAYWNDEKGEVILNDSIDISIAVATEKGLMTPIIKNADQKTISAISSEVKELATKARDGKLKPHEFQGGTFSISNLGMFPVDKFCAIINPPQACILAVGRGNKVVEPVIAADGIEKPSIANKLSLTLSADHRVFDGKIGGAFLSALQSNFSDIRRLLL 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03161 626 ProSiteProfiles Biotinyl/lipoyl domain profile. 75 151 IPR000089 -
Pste4g03161 626 FunFam Acetyltransferase component of pyruvate dehydrogenase complex 381 624 - -
Pste4g03161 626 MobiDBLite consensus disorder prediction 287 314 - -
Pste4g03161 626 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 100 129 IPR003016 -
Pste4g03161 626 SUPERFAMILY Peripheral subunit-binding domain of 2-oxo acid dehydrogenase complex 312 357 IPR036625 GO:0016746
Pste4g03161 626 Gene3D - 200 302 - -
Pste4g03161 626 Gene3D - 69 174 - -
Pste4g03161 626 ProSiteProfiles Biotinyl/lipoyl domain profile. 201 277 IPR000089 -
Pste4g03161 626 Gene3D - 380 626 IPR023213 -
Pste4g03161 626 SUPERFAMILY Single hybrid motif 78 166 IPR011053 -
Pste4g03161 626 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 226 255 IPR003016 -
Pste4g03161 626 SUPERFAMILY CoA-dependent acyltransferases 392 626 - -
Pste4g03161 626 MobiDBLite consensus disorder prediction 164 190 - -
Pste4g03161 626 Pfam Biotin-requiring enzyme 78 149 IPR000089 -
Pste4g03161 626 Pfam Biotin-requiring enzyme 204 275 IPR000089 -
Pste4g03161 626 MobiDBLite consensus disorder prediction 359 381 - -
Pste4g03161 626 NCBIfam pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase 204 617 IPR006257 GO:0004742|GO:0006090|GO:0045254
Pste4g03161 626 FunFam Acetyltransferase component of pyruvate dehydrogenase complex 71 175 - -
Pste4g03161 626 FunFam Acetyltransferase component of pyruvate dehydrogenase complex 197 301 - -
Pste4g03161 626 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 397 625 IPR001078 GO:0016746
Pste4g03161 626 Pfam e3 binding domain 318 352 IPR004167 GO:0016746
Pste4g03161 626 CDD lipoyl_domain 206 275 - -
Pste4g03161 626 Gene3D - 318 359 IPR036625 GO:0016746
Pste4g03161 626 MobiDBLite consensus disorder prediction 166 186 - -
Pste4g03161 626 ProSiteProfiles Peripheral subunit-binding (PSBD) domain profile. 318 355 IPR004167 GO:0016746
Pste4g03161 626 SUPERFAMILY Single hybrid motif 201 294 IPR011053 -
Pste4g03161 626 PANTHER DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED 198 626 IPR045257 GO:0006086|GO:0045254
Pste4g03161 626 MobiDBLite consensus disorder prediction 358 394 - -
Pste4g03161 626 CDD lipoyl_domain 80 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03161 Pste-Chr4 23122284 23144318 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03161 194 626 Acyl Lipid Metabolism Gene Families AT3G13930 41.921 3.91e-109 337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g03161 4 23122284 23144318 Pste4g03161 4 23122284 23144318 ECH