Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g03082 TCCATGACAAGCTCTCTCTCTCTCTCTATCTCTATCTGCTTCCACAAAACGCCATTTCCTTATATATCCCTTCTCCCTCAGCTTTCTTCTGCTTCCGAACGCCACCACCATAAATGTATTTTTTCACTGAGAAAATGCAGCGTTTGAAGATGGGCTTCCCTGACTATGTCCAAGCATTGGAAGAAGAACGCCGTAAAATTCAGGTCTTCTCCAAAGAGTTGCCTCTTTCCTTGGAACTCGTTTCTCAAGCCATTGAAACTTGCAAACAGCAATTGTCTGGCACAACGACTGAGTATAATTTAAATGGCCAATCGGAGTGTTCAGAGCAGACAACATCAACGGAAGGGCCTGTTTTGGAGGAGTTCATGCCAATCAAGAAGAGGACGTCATCATCATCCCCTTGTTGTGATGAGGATGATGAAGTTGAAGTTGAAGTTGAAGTTGATGAGCAACATTCTCACAAGCAAAAGGTTTCAAAGGAGGATAAGAACAGTGATAAGAGGAAATCAGACTGGCTTAGATCTGTTCAGTTGTGGAATCCAGATCCCCCAACTGAGGAAGATGTGACTAGAAAAGTGGCTGGGACAGAATTGAAGAGAAATGGAAGTGGTGGTGGTGCTTTCCAGCCATTCCACAAGGAAGAAAGAGCTGGAAAGTCAAGTGAACCATTGAGTAAGGCACCCTCTTCAACCCAGGTAGCTGCTGTGAGTTCTAGCGCTGTAGAACGCCCAACAGAAAAATGTCTGAATGATGGACAGAGAAAGCAGCGCAGGTGCTGGTCGCAGGATTTGCATAAGCGCTTCTTGCATGCCCTTCAGCAGCTTGGGGGTGCAGATTCTGCCACACCAAAGCAAATCAGAGAGCTAATGAATGTTGATGGCCTCACAAATGACGAAGTAAAAAGCCATTTACAGAAATACCGATTGCACACTAGAAGGCCTAGTCCCATGGTCCACAACAGTTCCACTCCACAAACAACACCTTTTGTCCTTGTAGGAAACATTTTTGTTCAATCACCAGAATATGCAGCCATAGCTACCTCAACAGCATCCAGAGAAGTGACCACAGTTGCAGCACCTGCTGGAATTTATGCACCAGTGGCCACACATCCTACACCTGCTTCACACCCACGGGCTGATTCAATTAAGAAGCCACAGTTTAAGAAAGTGGAGCTGTTTGACCATTCAAATTCAGAGGAAAGGGCCAATCACAGTGAAGGAGCTGTTCACTCAAATTCCCCTACCTCATCCTCCTCTACACATACCTCTACTTCCCCTGGCTATTGAGTTTTGAAATGTTGCACAAGTTTTGTAACCAAATTGCTGTAGAAAGTCCTTTGATATCTTCTTCTGACCTTTTTTGTACGAAAATGTTCTTTACTCCTGTTTTCTTGGATTCAAATCATAGCAGTGAATACACAGAAAGTGACAGTTTTGATGTTAAATAAGTTCCATCCTCTTTAGCTGGCCACCATGTTATTTCCTTGGCACAGA 1493 0.4421 MYFFTEKMQRLKMGFPDYVQALEEERRKIQVFSKELPLSLELVSQAIETCKQQLSGTTTEYNLNGQSECSEQTTSTEGPVLEEFMPIKKRTSSSSPCCDEDDEVEVEVEVDEQHSHKQKVSKEDKNSDKRKSDWLRSVQLWNPDPPTEEDVTRKVAGTELKRNGSGGGAFQPFHKEERAGKSSEPLSKAPSSTQVAAVSSSAVERPTEKCLNDGQRKQRRCWSQDLHKRFLHALQQLGGADSATPKQIRELMNVDGLTNDEVKSHLQKYRLHTRRPSPMVHNSSTPQTTPFVLVGNIFVQSPEYAAIATSTASREVTTVAAPAGIYAPVATHPTPASHPRADSIKKPQFKKVELFDHSNSEERANHSEGAVHSNSPTSSSSTHTSTSPGY 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g03082 390 MobiDBLite consensus disorder prediction 109 135 - -
Pste4g03082 390 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 214 274 IPR017930 -
Pste4g03082 390 MobiDBLite consensus disorder prediction 185 201 - -
Pste4g03082 390 MobiDBLite consensus disorder prediction 109 201 - -
Pste4g03082 390 FunFam Myb family transcription factor 216 274 - -
Pste4g03082 390 MobiDBLite consensus disorder prediction 343 368 - -
Pste4g03082 390 Pfam Myb-like DNA-binding domain 219 270 IPR001005 -
Pste4g03082 390 MobiDBLite consensus disorder prediction 369 390 - -
Pste4g03082 390 SUPERFAMILY Homeodomain-like 215 275 IPR009057 -
Pste4g03082 390 Gene3D - 216 274 - -
Pste4g03082 390 NCBIfam myb-like DNA-binding domain, SHAQKYF class 217 272 IPR006447 GO:0003677
Pste4g03082 390 MobiDBLite consensus disorder prediction 328 390 - -
Pste4g03082 390 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 6 342 IPR044787 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g03082 Pste-Chr4 22382648 22384787 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g03082 4 335 G2-like Transcription Factor Family AT1G68670 46.610 4.45e-75 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pste4g03082 Myb_DNA-binding 3e-06 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g03082 4 22382648 22384787 Pste4g03082 4 22382648 22384787 ECH