Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01305 ATGGCATCTTTCGATCCCAACGTTGATTCAAGTAATTCAGACACCTTCGGAGAATCCAATCACAAGAAGCGCAGGAAAATCGGAGACCATGCCGCTGATCATCATTCCGCCACCTCGGTCGCGTGGAGATCCCAGGCGGAGCAGCGGATCTATTCCCGTCGCCTCGTCGAGGCTCTCCGCCGGACTCCATCATCGCCGGCCAAGCCTGGAGCCGCCGGTCAGGTCCGCGAGACCGCCGACCGCGTCCTCGCCGCCACCGCCAGAGGCCGAACGCGGTGGAGCCGCGCAATTCTCAACCGGTGGAAGAAGCTCCGTACGCAGCACAAGAAGGCGAAGAAGGCATCAACCACCACCGGATTGAAGAGAACGAGGATTGGTGGCGGACAGACGAGGAACCGGTTACCGGCTGTGCAGAAGAAAGCGCGCGTTCTCAGCCGGTTGGTTCCCGGTTGTCGGAAGGTCTCCTTTCCAAACCTTCTGGAAGAAGCCACGGACTATATCTCCGCCTTGGAGATGCAAGTGCGAGCCATGACGGCTCTTGCCGAATTACTCGCCGGCGGCCCGCCCAACGCACTCTCCGGTGGCGCGTTGAGCTGA 597 0.608 MASFDPNVDSSNSDTFGESNHKKRRKIGDHAADHHSATSVAWRSQAEQRIYSRRLVEALRRTPSSPAKPGAAGQVRETADRVLAATARGRTRWSRAILNRWKKLRTQHKKAKKASTTTGLKRTRIGGGQTRNRLPAVQKKARVLSRLVPGCRKVSFPNLLEEATDYISALEMQVRAMTALAELLAGGPPNALSGGALS 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01305 198 MobiDBLite consensus disorder prediction 16 33 - -
Pste4g01305 198 MobiDBLite consensus disorder prediction 107 128 - -
Pste4g01305 198 MobiDBLite consensus disorder prediction 1 15 - -
Pste4g01305 198 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 121 170 IPR011598 GO:0046983
Pste4g01305 198 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 131 186 IPR036638 GO:0046983
Pste4g01305 198 CDD bHLH_AtIBH1_like 131 181 IPR044549 GO:0006355
Pste4g01305 198 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 43 184 IPR044660 GO:0006355
Pste4g01305 198 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01305 Pste-Chr4 9551809 9552405 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01305 1 177 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 46.392 1.09e-42 140
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01305 4 9551809 9552405 Pste4g01305 4 9551809 9552405 ECH