Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g01033 CTCAGTTTAAGAATCAGTCTCTACCTTTCACCTTTCTCCATACTCCACAGCCTATACCACTTTTCTTCTTTCTCTGCTTTCATCTACTCTCACACTTCTTCACTCCCTGCTAGAGATAGATAGAGATAGAGAGTGTGAGAAAACAAAACAAAAGGGTGATGGGTGTGAGAATGTGTGTTTTCCTTTTATAATGAACAAAGGACTACACTCCCTCTTCTTCCCTGAAGAAGATGGCAATCCAGCACCACAACGACCGACTAGAACACAACGAAAATGTCTCATCTGTCCTTGATGCCCTTTACTGTGATGAAGGAAAGTGGGAAGATGAAGAGGAAGAAGACAGTGATGTGACCACGAACAATGATGAGGTGCACCACACTGGAACTTCTCTTTTCCCTCTTCTCTTGTTGGAGCAAGACTTGTTCTGGGAAGATGAAGAACTAAACTCTCTCTTTTCCAAAGAGAAAGTTCAACAACAAGAAGTCTACGGCTATAACAATTTGAATAACAATAATAATAATAATAATAATAATATGCATTTGGACTCTTGTCTCTCTCAGCCTCGTCGTGAGGCAGTGGAATGGATGCTTAAAGTGAATGCTCACTATGGATTCTCTGCTCTCACCGCAACCCTGGCCGTTACTTACCTGGATAGGTTCCTTCTAAGCTTCCATTTTCAAAGGGAGAAGCCTTGGATGATCCAGCTTGTGGCTGTCACTTGCATCTCTTTGGCAGCTAAAGTTGAAGAAACTCAAGTGCCTCTTCTCTTGGACCTTCAAGTGCAAGACACAAAGTATGTGTTTGAGGCTAAGACTATTCAGAGAATGGAGCTTCTGGTGCTGTCCACCCTCAAATGGAAGATGCACCCTGTCACCCCTCTCTCATTTCTAGATCACATTATAAGAAGGCTTGGATTGAAAACTCATCTTCACTGGGAGTTTCTCAGGCGCTGTGAGCATCTTCTTATGTCTGTGCTTTTAGATTCAAGATTTGTTGGGTGTCTTCCTTCTGTGTTGGCCGCTGCAACAATGCTGCATGTTATAGACCAGATTGAACACTGCGGTGGGATGGAATACAAAAATCAGCTTCGGAGTGTGCTCAAAATTAACAAGGAGAAAGTAGATGAATGTTATAATGCCATTCTCCAAGTCTCAAAAGCCAATAAGTACGGTCATAATAACAGCCCTAGCAAGCGTAAGTATGAGCAAATCCCAGGAAGCCCAAGTGGCGGAATTGATTCTGCACTTAGCTCTGATGGTTCCAACGATTCGTGGGCAGTGGGGTCATCATTATATTCACCACAAGAGCCTCTGTTCAAGAAGAGCAGAACCCAAGGCCAACAAATGAAATTGTCACCACTTAACTGGGTCATTGTCGGAATTGTTGGCACCTCACCTTGATAACCCTTTCTCTCTCCTTCACAAACAAAGGCAAAAAAAAAAGCTTATATTTATTTACTGTGGTAATTAATCTTTCCATGCATGTTGCTAAACTATAGTGCCTTCCCTCTATGTATCTCTTCATTTCCAACAATGTCCCACATTCATTTACCTCTCTTGAAGAGGCATGGTGATTCTGGAGGAAGTAGTCTCCGCGGGAAGAGGAGGACAAAGTTGGCAATGAAGAATTGAAGACTATCACCAGCACTCTATAATATGTTTCAGGCACTATTTTTTTTTTTCCTTCAATTGGTCTCGTATAGACCATACCAAATTTGGACATACTTATATCATATTTTCTATAATAAATTGGGAACAATTTTGTTCATTTG 1771 0.4156 MAIQHHNDRLEHNENVSSVLDALYCDEGKWEDEEEEDSDVTTNNDEVHHTGTSLFPLLLLEQDLFWEDEELNSLFSKEKVQQQEVYGYNNLNNNNNNNNNNMHLDSCLSQPRREAVEWMLKVNAHYGFSALTATLAVTYLDRFLLSFHFQREKPWMIQLVAVTCISLAAKVEETQVPLLLDLQVQDTKYVFEAKTIQRMELLVLSTLKWKMHPVTPLSFLDHIIRRLGLKTHLHWEFLRRCEHLLMSVLLDSRFVGCLPSVLAAATMLHVIDQIEHCGGMEYKNQLRSVLKINKEKVDECYNAILQVSKANKYGHNNSPSKRKYEQIPGSPSGGIDSALSSDGSNDSWAVGSSLYSPQEPLFKKSRTQGQQMKLSPLNWVIVGIVGTSP 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g01033 389 PANTHER CYCLINS 71 313 IPR039361 -
Pste4g01033 389 SMART cyclin_7 117 205 IPR013763 -
Pste4g01033 389 MobiDBLite consensus disorder prediction 314 344 - -
Pste4g01033 389 Pfam Cyclin, C-terminal domain 214 326 IPR004367 -
Pste4g01033 389 SUPERFAMILY Cyclin-like 105 212 IPR036915 -
Pste4g01033 389 CDD CYCLIN_AtCycD-like_rpt1 112 209 - -
Pste4g01033 389 SMART Cyclin_C_2 214 343 IPR004367 -
Pste4g01033 389 Pfam Cyclin, N-terminal domain 106 211 IPR006671 -
Pste4g01033 389 CDD CYCLIN_AtCycD-like_rpt2 214 304 - -
Pste4g01033 389 ProSitePatterns Cyclins signature. 112 143 IPR006671 -
Pste4g01033 389 FunFam D3-type cyclin 105 212 - -
Pste4g01033 389 Gene3D - 213 304 - -
Pste4g01033 389 FunFam CYCLIN D32 213 302 - -
Pste4g01033 389 SUPERFAMILY Cyclin-like 215 324 IPR036915 -
Pste4g01033 389 Gene3D - 106 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g01033 Pste-Chr4 7949707 7951919 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g01033 1 323 Core Cell Cycle Gene Families AT4G34160 54.769 3.27e-114 336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g01033 4 7949707 7951919 Pste4g01033 4 7949707 7951919 ECH
Pste2g01088 2 11655219 11656878 Pste4g01033 4 7949707 7951919 ECH
Pste8g00909 8 4718292 4720308 Pste4g01033 4 7949707 7951919 ECH