Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00940 AATCTTCTTCTCGAGCCATGGCAGCGTCGCCATCGTCCTCTGCGGCGGCGTCCACCAACATCATGCTCGCAATCTACGAGAAGAAGACGAACGGCTTAGATCTGTATCGGCCTCTCCGCAATTACGTGGCCTTCCACTACTCCGAGCGGGAGGCGCAGAACCTGGAGGACGATCTCCAAACCCTGAAACAACTCCGTTCCGACGTGGAGCGCCACTCCGATCCGTCACTCCCGGCGCGCCGCGACCTCCTCCAAACGTACTTCAAATCCCTATGCCTGGTGGAGACGCGGTTCCCTATCTCCCCCGACCCCGACCACGTCAACGCCCTCACCTTCGTCTGGTTCGACGCCTTCAAGCCCAAACAGAAGGCCTCGCAGCAGAACATTCACCTCGAGAAGGCCTCCGTGCTCTTCAATTTGGGCGCCGTTTACAGCCAGATTGGATTGTCCTATGATCGGAACACCGTCGACGGCCGCCGCCAGGCCTCGCATGCCTTCATTGCCGCCGCCGGATCCTTCGCCTTCCTCCGCGACAACGCCTCTATGAAGGCCTCCGTTGGCAACTCCACCACTGTTGATTTGTCCGTTGAATGCGCCGGGATGCTGGAGAAGCTCATGCTCGCGCAGGCGCAGGAATGCGTCTTCGAGAACACAATTGCCAAAGGGAGCACTCCCGGTGTCTGTGCCAAGATCTCCAGACAGGTTGGGATTTATTATGAGGAAGCTTTAGCTGCGCTGAATGTTGCACCCTTGAGCCAGCATTTCGATAAGTCCTGGATAGTTCACGTGCAGTTAAAAGCGGCACTGTTCTATGCGGAAGCTTGTTATAGGTATGGATTTGAGTTGCATGATAAAGAGGAGATAGCAGAGGAGATTGCACGATTGCGGAGTGCTGTTAATGTGCTGACTGAGGCGAAGAAAAGCTCTAAGAGTGCTGCGGCGCAAATCCTAGAAGCAATTGGCAAGTTAGAGGCCAATATTAACCGGAACCTTGAAAGGGCTGTTAAGGAGAATGATAGGGTTTACCTCATGAGAGTTCCTACGCCAAGTTCATTAACACCTCTTCCGGCATTTTCTATGGTGAAGTCCATGCCGATGAATGAGGTGCTGGATGCAAGCAAAGAGAAGATGTTTGCAAGTCTTGTACCTGACAGCAGTGCAAAGGCCCTCTCCCGGTATACTGAAATGGTAGATGATGTTATAAGAACACAGGCTGAAAAGTTGCAGCAAGCTAGCGAGCTAACCCGAGTTAGGCTTAAGGAGATGGAGCTGCCAGATTCCATTCTTGCTTTGGAAGGAAATTTTACTCTACCAACAAGTCTCAAAGAAGATGTGGAGGCTGTGCAGATCAGTGGGGGCCCTGCTGGTTTGGAAGCAGAGCTGCAGCAACTTAAGGACCTAAGGAGGGTTAATCAAGAGTTGCTAGTCCAGACTGAGGAGTTGTTGCAGAAGGAAGCAAGAGAAGATTCTCAATTCAGAACTCAATTTGGCACAAAATGGACCAGGCCTCAATCAAGCACCTTGACCAAGAACTTGCAGGACAGGTTGAACAGGTTTGCCGGTAACTTGAAGCAAGCTGCAGAAAGTGATGGTAGGATTGAGCGTTCGGTTAGAGAACATTCAGCACTCATGTCGATCCTTGATGCCCGTCCGATTGAATCTGCACTTCCAAGCTTGGCAAGGCCTATTATGTCTTTTGATCAAAATGAAGATGCTATTGTGGGATCTCTCAAGCAAAGCTTGAGGCAACTAGAAACTCTTGGAGCTCAAAGGGCTGGTCTTGAAGATATGCTTAAAGAGATGAAAAGAAAGGATGATATATTACCAAAGTTGATGACATCCACCGGTTCATATGATGATCTCTTCAAGAAGGAGATAGCAAAATATGACCATATCTGTGAAGAAATAGCTCAAAATATCGAGGCACAAGAGCAATTGTTGCTGCAGATACAGGCTCAAAATGATGAGTTCTCTGTCATCTTCAATCTTGAAGATTACAAAGCTTCACGTGAAAAGGCCTACAAGCAGATTGAAGCTGCCATTGCAAAATTTCGAGAAATAAAGGACAACATCAACGAAGGGTTAAAATTCTATGTTACTCTGCAGGATGCAATGACAAATGTAAAGCAGCAGAGCAACGACTTTGTAATGACAAGGAACATCCAGTGCAGGGAAATGATTGAAGAGGTTCAGAGACAAGTGGCTGGTCTGAGTTTCCAGGATAACAAAAACACAGGTGCTTTTAACAGCAGCTACCCTTCTGTGGGAAGCCAAAATCAAAGATCCACTACGCAAACAGATCCTCGTCCCCAAACACTTTATTATCAGCCTGTTGAGCAGCCACCAGTTCCTCCCTATGGCCATCATCCATCTCCCCCGTATGGTGCTCCTGCACATCATCAGCCTCCGCCTCCATACCACATTCCACCATCAACTACTCCATACCCACCCCCTCAGGTCCATCAGCAGCCACCGGCAAACCATGAGTATGGCCAACCAGCATATCCTGGATGGCGTGGTCCGTACTACAATTCACAGGCACAGCAACCTGGTTCTGTTCCTCGGCCTCCTTATACCATTCCATCTCCATATCCTCCGCCTCACCAAAGTGGCTATTATAAGCAGCAA 2627 0.4933 MAASPSSSAAASTNIMLAIYEKKTNGLDLYRPLRNYVAFHYSEREAQNLEDDLQTLKQLRSDVERHSDPSLPARRDLLQTYFKSLCLVETRFPISPDPDHVNALTFVWFDAFKPKQKASQQNIHLEKASVLFNLGAVYSQIGLSYDRNTVDGRRQASHAFIAAAGSFAFLRDNASMKASVGNSTTVDLSVECAGMLEKLMLAQAQECVFENTIAKGSTPGVCAKISRQVGIYYEEALAALNVAPLSQHFDKSWIVHVQLKAALFYAEACYRYGFELHDKEEIAEEIARLRSAVNVLTEAKKSSKSAAAQILEAIGKLEANINRNLERAVKENDRVYLMRVPTPSSLTPLPAFSMVKSMPMNEVLDASKEKMFASLVPDSSAKALSRYTEMVDDVIRTQAEKLQQASELTRVRLKEMELPDSILALEGNFTLPTSLKEDVEAVQISGGPAGLEAELQQLKDLRRVNQELLVQTEELLQKEAREDSQFRTQFGTKWTRPQSSTLTKNLQDRLNRFAGNLKQAAESDGRIERSVREHSALMSILDARPIESALPSLARPIMSFDQNEDAIVGSLKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSTGSYDDLFKKEIAKYDHICEEIAQNIEAQEQLLLQIQAQNDEFSVIFNLEDYKASREKAYKQIEAAIAKFREIKDNINEGLKFYVTLQDAMTNVKQQSNDFVMTRNIQCREMIEEVQRQVAGLSFQDNKNTGAFNSSYPSVGSQNQRSTTQTDPRPQTLYYQPVEQPPVPPYGHHPSPPYGAPAHHQPPPPYHIPPSTTPYPPPQVHQQPPANHEYGQPAYPGWRGPYYNSQAQQPGSVPRPPYTIPSPYPPPHQSGYYKQQ 870
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00940 870 MobiDBLite consensus disorder prediction 769 817 - -
Pste4g00940 870 MobiDBLite consensus disorder prediction 735 767 - -
Pste4g00940 870 CDD BRO1_Alix_like_1 16 371 - -
Pste4g00940 870 Coils Coil 279 299 - -
Pste4g00940 870 CDD V_Alix_like_1 377 713 - -
Pste4g00940 870 SMART BRO1_2 15 399 IPR004328 -
Pste4g00940 870 Coils Coil 39 66 - -
Pste4g00940 870 PANTHER PCD6 INTERACTING PROTEIN-RELATED 15 868 - -
Pste4g00940 870 Pfam BRO1-like domain 16 394 IPR004328 -
Pste4g00940 870 Gene3D alix/aip1 like domains 423 703 - -
Pste4g00940 870 MobiDBLite consensus disorder prediction 735 870 - -
Pste4g00940 870 Gene3D alix/aip1 in complex with the ypdl late domain 377 655 - -
Pste4g00940 870 MobiDBLite consensus disorder prediction 848 862 - -
Pste4g00940 870 Coils Coil 657 684 - -
Pste4g00940 870 ProSiteProfiles BRO1 domain profile. 15 409 IPR004328 -
Pste4g00940 870 Coils Coil 578 598 - -
Pste4g00940 870 Coils Coil 627 647 - -
Pste4g00940 870 Coils Coil 451 478 - -
Pste4g00940 870 Gene3D alix/aip1 like domains 10 376 IPR038499 -
Pste4g00940 870 Pfam ALIX V-shaped domain binding to HIV 431 715 IPR025304 GO:0005515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g00940 4 7276154 7290282 Pste4g00940 4 7276154 7290282 ECH