Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00894 CATCCTTCTGGAGCACACAGGTTACCTGAAGAAAACGAGTGGAGAAAGAAATAAGCTCATAACCGAAACGACGCCGCACGAGTTTGCATGCTCTCCGTTCTGCAACCCTCGTGCATCCCCCCCCAAACCCTAAAACCCTCCATTCCTCTTCCGTTTCCGGCCATGAAGGACCGCCACACGCTGTCCTCCTATGGCTCCGTTTACATTCCGCCGCACCACCGCCTACGTTCCGTCGCCAATTTCAACAACGCCACCTCTCTGGTTCGCGCCAAACTCCACGAAAACCCTACACCTGCTGTTACTACTCTGCAACCACCGTTGACGGCACAAGTTCCCGAAAAACTCGTCCGCGCTTCGTTTCTGCTTATGACGACGCCGTTTCAGAGGAAGGCTCCGATCGTGAATTTGAACCTCCCTCACTACCGGTTCCCTCTCGTTATTCTAAGTAATACTTCCCCCAATGATAACGTTGAGGAGTGGAAGCGGAAATTTACTGTGCTCTTAAATGACAAGAGTAAGCAAGAGATGATCTCGAGGGAGAGAAAGGATAGGCGTGATTTTGAGCGAATAGCATTTCTAGCAAGCAGAATGGGGTTGTATAGCCATATGTATGCTAAGGTTGTTGTCTTCAGTAAGGTCCCACTTCCAAATTACAGATATGATTTGGACGATCGGCGGCCTCAGAGGGAGGTGAACTTGTCTATCACCACATTTACCCAAGTTAATGCATATTTTGAGGAATATCTTAGCCAAAAATCCAGGATGAAGAAAAGCTTTTCTGATCTGTTTTCTGCAAGATCAAGCAGTAATGGCAGTATTGGTACGGATGAAGGGCTTTTTGAGCTTCCTGAGCCACTAGCATCCAGTAAGGCTGTTATGGAGAAAATTCTATGCCAGAGGAGCTTACAAATGCGCAATCAGCAGCAAGCTTGGCAGGAATCACCTGAAGGAAGAAAAATGCTAGAATTCCGCAGAAGTCTCCCTGCTTATAAAAAGAAAGAAGAAATATTATCAGTCATATCAAGGAATCAGAATCTCCGTAAATATGCAGTTGAATTTATTATTGTCAAAATTTTCAAACCCTTGATATCAGGTGAAGCTATAAAGGTAGTTATCATTTCTGGCGAAACAGGCTGTGGCAAGACAACACAAATTCCACAATTTATTTTAGAATCTGAGATAGAATCAGTTCAGGGAGCGTCTTGTAATATTATATGCACACAACCGAGACGCATTTCAGCCATGTCTGTTTCTGAAAGAGTGGCCTCTGAGAGAGGGGAGAAATTGGGAGAATCTGTTGGATTTAAAGTTCGACTTGAGGGTATGAAAGGGAGAGATACCCATCTTCTCTTTTGCACCACTGGCATCTTATTAAGAAGATTGCTAGCAGATAGAAAGTTAAAAGGTGTAACTCATGTTATTGTGGATGAAATTCATGAGCGTGGGATGAATGAAGATTTTCTACTTATTATCCTTAAAGAACTCCTTCCCGAAAGGCCAGAACTGAAACTGATTTTGATGAGTGCTACCCTAGATGCAGAACTCTTTTCTTTGTACTTTAATGGGGCTCCAATTATGTTTATTCCGGGCTTCACATACCCTGTTACAACTCATTTTTTGGAGAACATTCTTGAAATGACGGGCTACAAATTAACTCCTTATAATCAAATCGATGATTATGGTCAAGAAAGGATGTGGAAAGCGAACAAACAGGCCCCAAGAAAGAGGAAAAGCCAAATTGCTTCCACTGTAGAGGATGCAATTAGAGCTGCTGATTTCAAAGATTACAGCCCACAGACACAGGAGTCCTTGTTATGTTGGAATCCTGACTGTATTGGTTTTAGTCTCATTGAATATATTTTATGCCATATATGTGAGAATGAAAGGCCTGGTGCTGTTCTGGTTTTCATGACTGGATGGGATGATATAAGCTCTCTGAAAGAGAAGCTCCTGACACACACTGTCTTAGGAGATCCAAACCGTGTTTTGTTGCTTACATGTCACGGCTCAATGGCTAGTTCAGAGCAGAGATTAATATTTGAAGAGCCTGAAGATGGAGTAAGAAAAGTGGTGCTAACAACAAATATTGCTGAAACTAGTATCACGATAAATGATGTTGTTTTTGTTCTTGACTGCGGAAAGGCAAAAGAAACATCATATGATGCACTGAATAACACACCTTGTTTGCTCCCTACATGGATCTCCAAGGTTTCTGCTCAACAAAGAAGAGGAAGAGCTGGTCGGGTTCACCCAGGAGAGTGTTACCATCTCTATCCTAGATGTGTATATGATGCTTTTGCAGAGTATCAGTTGCCAGAAATTTTGAGAACACCTTTGCAATCTCTCTGTTTACAAATCAAAAGTCTAAAACTTGGAAGTATATCTGAGTTCTTATCTAGGGCCTTGCAGTCTCCTGAGATACTTGCGGTACAAAATGCAATTGAATATTTGAAAATTATTGGGGCCTTGGATGAGGATGAGAATCTCACTATTCTAGGGCGATATCTGACAATGCTTCCTATGGAGCCTAAACTTGGCAAGATGCTAATATTAGGTGCTATTTTCAATTGCCTGGATCCCATATTAACTGTTGTTGCTGGGCTTAGCGTGAGAGATCCTTTTCTAACACCAATGGATAAAAAGGATCTTGCAGATGCAGCAAAATCTCAATTCTGTGGTGCATACAGTGACCACCTTGCACTTGTAAGGGCGTATGAAGGTTGGAAAGATGCTGAAATGAACCTGGGTGGAGATGAATACTGCTGGAAAAATTTTCTTTCATCACAATCCATGAAAGCTATTGATGCTCTTCGGAGAGAGTTCATATGCCTACTCAAGGATATTGGATTAGTAGATAGCAACACAAACAGCTGCAATGCATGGAGCTCTGATTTAAATCTTATCCGAGCAGTTATTTGCTATGGTCTATATCCTGGAATTTGTTCTGTTGTGCATAATGAGAAATCTTTCTCTTTGAAAACAATGGAGGATGGGCAAGTGCTCCTATATTCGAACTCTGTGAATGCTCGGGAAACTAAAATTCCATATCCATGGCTAGTTTTTAATGAGAAGATAAAAGTGAACTCAGTTTTTCTTCGTGACTCAACAGCTGTGTCAGATTCAGTGGTGCTTTTGTTTGGTGGAAGCTTATTGAAAGGAGATGCTGATAATCACTTTAAAATGTTGGGAGGATATCTAGTGTTTTTCATGGAGCCCAGTGTTGCTGAAATGTACCAGAGTTTAAGAAGAGAACTTGATGACTTTATTCAGAACAAACTACTTTTTCCTAGAATCGGCATACAGTGGTATCATGATCTCCTATCTGCAGTAAGGCTGCTGATTTCGAATGACAAATGTGAAGGTAGATTTGTATTTGGTCGCCAGGTCCTTAAACCATCAAAGAAATCTAATATGATGGGCTTACATCCTGCCTTGGTTTCAAGGACTGAGAGTGGACCTGGGGGTGATAATTCTAAAAGTCAGCTCCAAACCTTGCTTACGAGAGCAGGATATGCAGCACCTGTCTACATGACGAAACAATTGAAAAACAATCAGTTTCAGGCTACTGTCGAATTCAATGGAATGCAGATTATGGGTCAACCTTGCAACAATAAAAAGAGTGCAGAAAAAGATGCTGCAGCTGAGGCACTGCAATGGTTGATGGGTGGAAAACAAACAGGCAGGGAGTATATCAATCACGTTTCAATGTTACTTAAGAAAAGTAAGAAGGAACACAATTAAGCAGTCAAACTAAAAAAGCTCATTGCTAAGGTAAAAGATCTCGAGGTGAACAATGAATGTGGTTCTTGCTCCCTTTTAGAGGGACGTGGTTTGACGGGGCATTGTTACTATATAGAGTCCTGGATCATTGAGTCAATTTGTTCATGACAACAGTCAAGGCCCTATCCAACATCTTCTAACGGATTGAATTTGAAGTTGGAAGATACTCATTCTTGATTGAAGCAAAATAAAGGATCATACGCAAACATGAATCAAGTAACTGCCAAATCAAGGCTTGATAAATTTTTACTGTCATTTTGATGCTTTTAGATCATGACCGATAATATAGATGGTAGGCAGGGTCATCGATAGGAGGGATTGGTACATAGCATTCATTTGTTGGGGGGGATGTGCACATTCAGCAGGAAATAATGCCTCACTCGAATTCTGAGTATACCCATTAATTCTTTGTATAGTAATTGTCAATTTTGACATCATTAAATTCGATATATGTTGAAGTTCTGGTATGTTTATTGTGTCTGGGAGCAAAACGAGATGGAGAGAATTAAGAGGTTTTGGACAAAATTGCAGGTGAAAGAAATAGAAGACCGAAAGGATTGTTCCATCAATAAATTTGGGCGGTGACTGATGTATAAGTCAAATTGGCCACATTCTTAGTCGTCTAAGACGGCAAGACCTACAAGATGAACTCAATGAGGTTGTCGCCAGCTCAACAGTGTTTGATGGAACGAAAAATAGATGAAAGGGAAGTAGAAAG 4498 0.4111 MLSVLQPSCIPPQTLKPSIPLPFPAMKDRHTLSSYGSVYIPPHHRLRSVANFNNATSLVRAKLHENPTPAVTTLQPPLTAQVPEKLVRASFLLMTTPFQRKAPIVNLNLPHYRFPLVILSNTSPNDNVEEWKRKFTVLLNDKSKQEMISRERKDRRDFERIAFLASRMGLYSHMYAKVVVFSKVPLPNYRYDLDDRRPQREVNLSITTFTQVNAYFEEYLSQKSRMKKSFSDLFSARSSSNGSIGTDEGLFELPEPLASSKAVMEKILCQRSLQMRNQQQAWQESPEGRKMLEFRRSLPAYKKKEEILSVISRNQNLRKYAVEFIIVKIFKPLISGEAIKVVIISGETGCGKTTQIPQFILESEIESVQGASCNIICTQPRRISAMSVSERVASERGEKLGESVGFKVRLEGMKGRDTHLLFCTTGILLRRLLADRKLKGVTHVIVDEIHERGMNEDFLLIILKELLPERPELKLILMSATLDAELFSLYFNGAPIMFIPGFTYPVTTHFLENILEMTGYKLTPYNQIDDYGQERMWKANKQAPRKRKSQIASTVEDAIRAADFKDYSPQTQESLLCWNPDCIGFSLIEYILCHICENERPGAVLVFMTGWDDISSLKEKLLTHTVLGDPNRVLLLTCHGSMASSEQRLIFEEPEDGVRKVVLTTNIAETSITINDVVFVLDCGKAKETSYDALNNTPCLLPTWISKVSAQQRRGRAGRVHPGECYHLYPRCVYDAFAEYQLPEILRTPLQSLCLQIKSLKLGSISEFLSRALQSPEILAVQNAIEYLKIIGALDEDENLTILGRYLTMLPMEPKLGKMLILGAIFNCLDPILTVVAGLSVRDPFLTPMDKKDLADAAKSQFCGAYSDHLALVRAYEGWKDAEMNLGGDEYCWKNFLSSQSMKAIDALRREFICLLKDIGLVDSNTNSCNAWSSDLNLIRAVICYGLYPGICSVVHNEKSFSLKTMEDGQVLLYSNSVNARETKIPYPWLVFNEKIKVNSVFLRDSTAVSDSVVLLFGGSLLKGDADNHFKMLGGYLVFFMEPSVAEMYQSLRRELDDFIQNKLLFPRIGIQWYHDLLSAVRLLISNDKCEGRFVFGRQVLKPSKKSNMMGLHPALVSRTESGPGGDNSKSQLQTLLTRAGYAAPVYMTKQLKNNQFQATVEFNGMQIMGQPCNNKKSAEKDAAAEALQWLMGGKQTGREYINHVSMLLKKSKKEHN 1217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00894 1217 Pfam Helicase associated domain (HA2) 784 857 IPR007502 GO:0004386
Pste4g00894 1217 SUPERFAMILY dsRNA-binding domain-like 1123 1191 - -
Pste4g00894 1217 CDD SF2_C_RHA 567 729 - -
Pste4g00894 1217 Gene3D - 585 740 IPR027417 -
Pste4g00894 1217 SMART helicmild6 612 721 IPR001650 -
Pste4g00894 1217 SMART DRBM_3 1129 1192 IPR014720 -
Pste4g00894 1217 Pfam DEAD/DEAH box helicase 340 484 IPR011545 GO:0003676|GO:0005524
Pste4g00894 1217 CDD DEXHc_RHA-like 341 499 - -
Pste4g00894 1217 FunFam DExH-box ATP-dependent RNA helicase DExH3 331 501 - -
Pste4g00894 1217 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 939 1020 IPR011709 -
Pste4g00894 1217 FunFam DExH-box ATP-dependent RNA helicase DExH3 1107 1196 - -
Pste4g00894 1217 Gene3D - 1112 1196 - -
Pste4g00894 1217 ProSiteProfiles Double stranded RNA-binding domain (dsRBD) profile. 1128 1193 IPR014720 -
Pste4g00894 1217 PANTHER ATP-DEPENDENT RNA HELICASE 243 1023 - -
Pste4g00894 1217 Gene3D - 763 865 - -
Pste4g00894 1217 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 341 900 IPR027417 -
Pste4g00894 1217 Pfam Helicase conserved C-terminal domain 588 720 IPR001650 -
Pste4g00894 1217 FunFam Putative ATP-dependent RNA helicase DHX36 763 867 - -
Pste4g00894 1217 SMART ultradead3 313 514 IPR014001 -
Pste4g00894 1217 FunFam DExH-box ATP-dependent RNA helicase DExH3 583 739 - -
Pste4g00894 1217 SMART ha2_5 783 873 IPR007502 GO:0004386
Pste4g00894 1217 Gene3D - 258 501 IPR027417 -
Pste4g00894 1217 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 587 761 IPR001650 -
Pste4g00894 1217 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 333 500 IPR014001 -
Pste4g00894 1217 Pfam Double-stranded RNA binding motif 1129 1191 IPR014720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00894 Pste-Chr4 6937593 6951737 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g00894 4 6937593 6951737 Pste4g00894 4 6937593 6951737 ECH