Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00858 AAAAGGCATCTGCAACCTTGTATAGACCAGCTGGTATGATATCTTCATACTTGCAGCCTATACAGTATGAGACTAAGGAAATGGAGAAAATTTGTGAATTTTGCACATCTTTGAGGCCACTTGTTTACTGTAAGGCCGATGCAGCATATCTTTGTCTATCTTGTGATGCAAAGGTGCATTTGGCAAATGCCTTGTCTGGCAGGCACCTCCGGAATCTTGTGTGTAACTCTTGTGGACACAATCTTGCTTATGTCCTGTGTTTGGACCGCAAAATGTTATTTTGTCGTGACTGTGATAAAAAGTTGCACAATGTTTCTTTACCACATAAGAAACGAGCTATCAGAAGTTTCATGGGTTGCCCTTCTGCTAACGACTTCGCAGCACTCTGGGGATATGAATTGAATGAGATTGAAAAGAGTGCCAGTCAGGATCAGTTTGATTCAGTTTCTTGTGTTTCTGCAGATTTGAATGTTATAAAAGTCTCAGGAAAGCCTGGCATTCAAACTGGGGTCCCTTCAATGCTATCTCGGGCCAAACTTGATGGGGAATCAACCAGTCAACAAGGTCAGATACTGTACAGTGATCAAGAGCGTCGAATTATTATGCAGCAGATTATTGATTTAAAATGGCTTCAACTAAATGAGGAGCTTGATTATTCTTCAAAGATCAATGGGCTAAAAGAAAAAGATTTATCTCCTGCGGTATTTCATACTCTTAAGAAATTGGATGAAAAATTCAATGAGCAAGCACAAAATTCCCAGGATCTTGCTAATAATGTTCTGGGAAAAGAATGTCCCATTAGGGAGCTGAATCCTGAAACTTTGCCTTCTACGTTTTCTTCTCAACTTGATCATTTATCCTGTTCTTCAATTATCGATCTTCCCATGCATGGAGAGTCGTTCTGGACATGCAGAAGTCCACTTCCTGGTAATCAGTTGTGGTCCCAAAATATCCAAGACCTGGGGATATGTGAAGAACTTGCGTATCAAGATGATTTTAATATTCCTGATGTTGACTTAACTTTCCAAAATTTTGATGAACTATTTGGAGGAGATCAAGATCCAATTAGAATACTGGTTGATGATCAAGATGTCTCCTGCTCTTCTTTAGAGAAGGATAAGTCAGTTGACAATACAAGTGCAATGGAGGATTCTTCAGCAGCTGCATCCATCACTATGTCCCAATCTGATCACGAGAACAAGGATATGAATCCTCTCAGCCAGTACTGTCCAAGAAACATGGATCCTTCACATGCAATCCAACCATTCGATTCAACTATGCCATTCTCTGTTTTGAGATTCAATGCGGAAAGCAAACATGATGACAGTGCCCTTTCTCCCTATAGTGAAGGCAAAGTTTATTCAGGCATGAGAAGCAAATTCGACTTTCTATCCAGGAAATCTGGAGCTAATGTAAGAAAGAGAGTGAAAGGCATTGCCATTGCCAAGGCAGAAAGCAAAGGACTTTTGCATATGCATGCTGTAGATATCTCTATTACACTCCAGACTGTTCTGCATAATGAAGCTTATATGTTCAAT 1538 0.3999 MISSYLQPIQYETKEMEKICEFCTSLRPLVYCKADAAYLCLSCDAKVHLANALSGRHLRNLVCNSCGHNLAYVLCLDRKMLFCRDCDKKLHNVSLPHKKRAIRSFMGCPSANDFAALWGYELNEIEKSASQDQFDSVSCVSADLNVIKVSGKPGIQTGVPSMLSRAKLDGESTSQQGQILYSDQERRIIMQQIIDLKWLQLNEELDYSSKINGLKEKDLSPAVFHTLKKLDEKFNEQAQNSQDLANNVLGKECPIRELNPETLPSTFSSQLDHLSCSSIIDLPMHGESFWTCRSPLPGNQLWSQNIQDLGICEELAYQDDFNIPDVDLTFQNFDELFGGDQDPIRILVDDQDVSCSSLEKDKSVDNTSAMEDSSAAASITMSQSDHENKDMNPLSQYCPRNMDPSHAIQPFDSTMPFSVLRFNAESKHDDSALSPYSEGKVYSGMRSKFDFLSRKSGANVRKRVKGIAIAKAESKGLLHMHAVDISITLQTVLHNEAYMFN 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00858 501 CDD Bbox1_BBX-like 19 59 - -
Pste4g00858 501 ProSiteProfiles Zinc finger B-box type profile. 58 102 IPR000315 GO:0008270
Pste4g00858 501 SMART bboxneu5 15 62 IPR000315 GO:0008270
Pste4g00858 501 SMART bboxneu5 63 102 IPR000315 GO:0008270
Pste4g00858 501 Coils Coil 227 247 - -
Pste4g00858 501 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 17 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00858 Pste-Chr4 6685261 6698826 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00858 16 344 C2C2-CO-like Transcription Factor Family AT1G68190 37.237 7.42e-62 204
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g00858 4 6685261 6698826 Pste4g00858 4 6685261 6698826 ECH