Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00777 CGTAATTAAACTGATAAATTAAAATAGAGTTGGTCTTATAGCGGCACGTATTAGAGAAGGAATACCTATAGGACTGAAATCGAGTTTTGTTTTATCTTCTGCAAATTCAAAACCCAATCTCAATCTTTTCCTTTGGTTTGAAATTGACCTCAGCAAAGCTTAGATCCCAAATCCCCACCTCGCAATTTCTCAGCCTTTTCCCATTCCGAGGAAATAAGCCAATCCACGACCGATCCAATGCCGTTTTGAATCCCGTGCCATCCTCCTTCACCGGGAACATCTTATTGCTTTTCAATTCCATTTTTGGAGCAGTTGGGTCCATCACTAACATGTCACACTGTTTTTGAAACACAAAAAAGCTCCTTTTTTTATCTTCCCTTTGGTGCTGCTCTCTCAGAGAGAAGGAGAGGGTGACGAATGGGGATGGGTTCCAAAATGGAAGGACCGTCTACCCCAGCAATTCGACGTGACCCATACGAGGTCTTGTCCGTGTCCAGAGACTCAACCGATCAAGAAATTAAAACCGCTTACAGAAAGCTTGCACTCAATACTACCATGATATCACATGTGGTTCTGTTTGTTTTGGAAGCTGCTGTTTTTTGTTTTCTTCAAGTGCGCCAGTTTCTTGTTTTGGTATCATTTTACACATCTCCATACAGGTATCACCCTGACAAGAATGCCAGCAATCCCGAAGCTTCAGAGCTATTTAAAGAGGTTGCATATTCTTATAGTATCTTGTCTGATCCAGAAAAGAGAAGGCAGTATGACAGCGCTGGATTTGAGGTCCCTTTCTTACTGTCCTTCCCATGTGAAATCAAAGCTCTGTTTTTTCTCCCTTTTCTGTTTTTCTTTTCCTATTTTCCCTACAGTGTGAAACGAAAAATATGGCCTCTGATATTGAAGAAACCTAAGTTATCAGGCTGGGCAAAGCAGCAAACAGATAAGAAATGGTTGCTTACCTGTGCACTTGATGCTGATAGCATGGACATGGAAATTGATTTATCTAATCTTGGGACTGTGAACACAATGTTTGCAGCTTTATTCAGCAAACTGGGTGTCCCTATCAAGACCACCATTTCAGCTAATGTTCTTGAAGAAGCTCTGAATGGAACAGTCACAGTCAGACCCCTTCCAATTGGAACATCAGTCAGTGGAAAGGTAGAGAAGCAATGTGCTCATTTTTTTGGTGTGACAATAAATGAGCAACAAGCTGATTCAGGCATTGTAATAAGAGTTACTTCAACTGCACAAAGCAAATTCAAGTTGCTCTACTTTGAACAAGATGCAAATGGAGGCTATGGTTTGGCATTGCAGGAAGATAGTGAGAAGACTGGCAAGGTGACATCTGCAGGAATGTATTTCTTGCATTTTCAAGTTTATAGAATGGATTCAACGGTGAATGCGTTAGCAATGGCCAAGGATCCTGAAGGGGCCTTCTTTAAAAGATTGGAAGGTCTTCAGCCTTGTGAAGTCTCAGAACTAAAGCCGGGCACTCATATATTTGCTGTTTATGGAGATAACTTCTTTAAGACTGCTAGCTATACAATTGAGGCAGTATGTGCAAAATCATATGAGGATACCACCCAAAAACTGAAGGACATTGAAGCTCAGATTTTAAGAAAGAGGAATGAGCTACGCCAATTTGAAGCAGAATATAGAAAGGCATTGGCACGATATCAGGAAGTGACAGACAGATACACAAAAGAAAAACAATCAGTAGACGAGCTTCTGAAACAAAGGGATGGTATCCATTCTTCCTTCACCATTGTGAAGTCAACCAATATTAGTGGAAGTGGTAGTAATTTAAGCAATGGAAGTTCTAGCAAATTAACTGGTGAAGAGAGCCCTGGGGAAGATGGAGGGTCAGATGGCAAGGATAAATCAGGCAAAAAGAAATGGTTTAACTTGAATCTTAGGGGTTCTGATAAGAGGCTGGGTTAATATTATTTAATACACTTTTGATTTTGCTTGTCTCTTTTAATCAGCTTGGGTTGCATTTTTATGTCTGGAGTATTTTTCCTTTGCTTGGTTCCACCAAGCTGATTAACCTTTTCATTGGTATGTGATGCCTTCGAAGGTATACAGTATTTGTCTTACTGTTTCCAATATTTTTGTACTCCGACAAACAAGACCCACACCATCCAATTTTCTTTGAGCATCCTGAACACTTAAATTTTTATATTGTAATTTGTAATGATATATTCATTTTTGTAACTTGCTTTCTAGTTTCTTCATCCTTGCTCCTTGCTTAATACAACG 2259 0.398 MGMGSKMEGPSTPAIRRDPYEVLSVSRDSTDQEIKTAYRKLALNTTMISHVVLFVLEAAVFCFLQVRQFLVLVSFYTSPYRYHPDKNASNPEASELFKEVAYSYSILSDPEKRRQYDSAGFEVPFLLSFPCEIKALFFLPFLFFFSYFPYSVKRKIWPLILKKPKLSGWAKQQTDKKWLLTCALDADSMDMEIDLSNLGTVNTMFAALFSKLGVPIKTTISANVLEEALNGTVTVRPLPIGTSVSGKVEKQCAHFFGVTINEQQADSGIVIRVTSTAQSKFKLLYFEQDANGGYGLALQEDSEKTGKVTSAGMYFLHFQVYRMDSTVNALAMAKDPEGAFFKRLEGLQPCEVSELKPGTHIFAVYGDNFFKTASYTIEAVCAKSYEDTTQKLKDIEAQILRKRNELRQFEAEYRKALARYQEVTDRYTKEKQSVDELLKQRDGIHSSFTIVKSTNISGSGSNLSNGSSSKLTGEESPGEDGGSDGKDKSGKKKWFNLNLRGSDKRLG 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00777 507 MobiDBLite consensus disorder prediction 459 507 - -
Pste4g00777 507 CDD DnaJ 18 109 IPR001623 -
Pste4g00777 507 ProSiteProfiles dnaJ domain profile. 18 120 IPR001623 -
Pste4g00777 507 ProSitePatterns Nt-dnaJ domain signature. 97 116 IPR018253 -
Pste4g00777 507 MobiDBLite consensus disorder prediction 477 507 - -
Pste4g00777 507 SUPERFAMILY Chaperone J-domain 79 148 IPR036869 -
Pste4g00777 507 SMART dnaj_3 17 112 IPR001623 -
Pste4g00777 507 PRINTS DnaJ domain signature 20 38 IPR001623 -
Pste4g00777 507 PRINTS DnaJ domain signature 92 112 IPR001623 -
Pste4g00777 507 PRINTS DnaJ domain signature 75 90 IPR001623 -
Pste4g00777 507 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 81 505 - -
Pste4g00777 507 Pfam DnaJ domain 18 44 IPR001623 -
Pste4g00777 507 Pfam DnaJ domain 80 117 IPR001623 -
Pste4g00777 507 MobiDBLite consensus disorder prediction 459 474 - -
Pste4g00777 507 Gene3D DnaJ domain 5 124 IPR036869 -
Pste4g00777 507 Coils Coil 385 440 - -
Pste4g00777 507 SUPERFAMILY Chaperone J-domain 17 43 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00777 Pste-Chr4 6073380 6080415 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00777 83 117 Miscellaneous Gene Families AT1G16680 57.143 8.16e-06 46.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g00777 4 6073380 6080415 Pste4g00777 4 6073380 6080415 ECH