Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00727 ATGAGACTTTCCATTCTGCAATCCCAACCCCACACCATAAAACGGTGGCCCCGCATGGACGCCTCCTTCCACCGCCGGAAAGACAAGGTGGTGGTGATCATGGGAGCCACAGGACAAAATGCAAGTGTACCGCGGCCTCGACATAACCACCAACAAGATCCCACACGCCCAGCGCCGCGGCGTCCCCACCACCTCCTCGGAGACGTCGACCCCGAACACGGCGAGTTCACCCCAGCCGACTTCCGCCACCGCGCCGGAGACCTGATCGAGGACATAAGCAGCCGGCGAAACCTCCCCATCGTGGTGGGAGGGTCGAACTCCTTCGTGCACGCGCTCCTCGTTGAAAACTTCGACCCTCACTTCAACGTCTTCCACAATGAGGGCCTGATATCCTCCGAGTTAAGGTACAGGTGCTGCTTCCTCTGGGTCGACATAGCCTTCCCCGTGCTATCGCAGTACTTAAGGGACCGAGTCGACGACATGCTACACTCCGGTATGGTCCAGGAGTTGGCTCACTTCTTCCACCCGGACCCGCCTTCTCCAACCGCCCTGGGTCTCCGTAAAGCCATTGGGGTGCCCGAGTTCGACCGCTTTTTCAATAAATACCCTCCCTCAATGGGCCTGGGCCTGGGCCTATGGGACCGGGACCGTGACCGTGCTTACCGGGAAGCCGTGCGGGCGATTAAGGACAACACTTGTGATTTGGCCCACCGTCAGATAGGGAAGATCCAACGGTTGAAGCGGGCCGGATGGGAGCTACGGAGGATCGACGCAACCGAGGCCTTTCGGCTGGTGCTGACGTCAGGCTCCCATGTATGGGAGACACAGGTGTTGGAACCAAGCGTGAAGATTGTGAAACGCTTCTTGATGGAGTAG 876 0.5913 MRLSILQSQPHTIKRWPRMDASFHRRKDKVVVIMGATGQNASVPRPRHNHQQDPTRPAPRRPHHLLGDVDPEHGEFTPADFRHRAGDLIEDISSRRNLPIVVGGSNSFVHALLVENFDPHFNVFHNEGLISSELRYRCCFLWVDIAFPVLSQYLRDRVDDMLHSGMVQELAHFFHPDPPSPTALGLRKAIGVPEFDRFFNKYPPSMGLGLGLWDRDRDRAYREAVRAIKDNTCDLAHRQIGKIQRLKRAGWELRRIDATEAFRLVLTSGSHVWETQVLEPSVKIVKRFLME 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00727 291 Pfam IPP transferase 61 115 - -
Pste4g00727 291 Pfam IPP transferase 133 240 - -
Pste4g00727 291 MobiDBLite consensus disorder prediction 49 64 - -
Pste4g00727 291 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 62 289 IPR039657 -
Pste4g00727 291 MobiDBLite consensus disorder prediction 37 64 - -
Pste4g00727 291 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 147 253 - -
Pste4g00727 291 Gene3D - 62 289 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00727 Pste-Chr4 5638778 5639721 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00727 126 289 C2H2 Transcription Factor Family AT2G27760 28.649 9.60e-14 69.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g00727 4 5638778 5639721 Pste4g00727 4 5638778 5639721 ECH