Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00696 TGCAGGAAAAAGAAAAGCGGCGGAAAGGATGGAAAAGACGAGTGTGGGAAGGTCTACGAGTGTAGATTTTGTTCCCTCAAGTTCTGCAAGTCTCAGGCTCTTGGGGGACACATGAACCGCCACCAGAGGGAAACAGAGACGCTGAACCAGGCCCGTCAACTGGTCTTTCGTAGCGATCACAACCTTGCTGCACAAGGTCCTCCTCACATAGGATGCTGCCAACCAATAGGAACAGGGGGTTACCATCCAGCAGGAGATCCAACAGTGGCATTGAGATTCCCGAGATACTTCTCAGGTTCATCCTCGACACACATGGCAGCAGCGGCGCCGGTGCCGGCGCCAGCGCCGGGTCCGCAAGCATATCTATATGCCACACCTTCGAGGCCAGTGTCTTTTGGGTCATCGCAGTTCCCACACCAGCATGCAGTGAACGATTACTATGTGGGTCACGTGATGAGTGGGAGCCACAGCCACGGACACTATGTGGGAGGAGGAGAGGGTACAAGCAGTTACACGTGCATTGGAGCACCGGTGGGGCAAGGTGGCGGATTTGGCGGTGGTGTTGGTAAGGACGGGACACTGCATAACAATCAGGAGGAAGGGTTGAGTTGGGGAAGGAGCTATTCAGGAGCGCAGCATCGTTTGGATCCTCCCTCAGCGATCAATCGGTTTCAAGATGAGATTCTTTCTTTGAGTGGTGGTGTTTTTGTTTTGTGTTATGTGACACGCAATCCGGAGAGAGAGACATTACAAGCTGACACATGGGGTCATCAAGTTAGGAAGAAGAAGAGAGAGAAAGAGAAAGAAGTGGTTTTGGTTTGGTTTATCTACAGTAACCGGGAACAGCTTTTGAGCTCATGGACACGCTCAGCTACTTTGGCTTGGAGTTGT 891 0.5208 CRKKKSGGKDGKDECGKVYECRFCSLKFCKSQALGGHMNRHQRETETLNQARQLVFRSDHNLAAQGPPHIGCCQPIGTGGYHPAGDPTVALRFPRYFSGSSSTHMAAAAPVPAPAPGPQAYLYATPSRPVSFGSSQFPHQHAVNDYYVGHVMSGSHSHGHYVGGGEGTSSYTCIGAPVGQGGGFGGGVGKDGTLHNNQEEGLSWGRSYSGAQHRLDPPSAINRFQDEILSLSGGVFVLCYVTRNPERETLQADTWGHQVRKKKREKEKEVVLVWFIYSNREQLLSSWTRSATLAWSC 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00696 297 ProSitePatterns Zinc finger C2H2 type domain signature. 21 41 IPR013087 -
Pste4g00696 297 ProSiteProfiles Zinc finger C2H2 type domain profile. 19 46 IPR013087 -
Pste4g00696 297 Gene3D Classic Zinc Finger 5 66 - -
Pste4g00696 297 PANTHER ZINC FINGER PROTEIN JAGGED 9 216 IPR045320 GO:0003700
Pste4g00696 297 FunFam Zinc finger protein STAMENLESS 1 1 65 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00696 9 181 C2H2 Transcription Factor Family AT1G13400 42.222 1.95e-24 96.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pste4g00696 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g00696 4 5344464 5345746 Pste4g00696 4 5344464 5345746 ECH