Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00641 TAATGTTATGTCATCCATAAGAAGCCTCCAAAAGCAGTTCACGGTGCCACACTCTACTCTATACTCTATACTCTCTACTCTCTAGAGTGAGCTATGGATTCCTCTGTTACTCTCTTTCTTTCCGCCCTTCTTCTTACTTGCTTTCTAAATGTTGCTGCTGAAGAAACTACTTCTTCTCAAAAATTTGCCCAGGGCTACCGTCTTTTAACCATTAAAGATACCCCTGATGGTGCCCTCTTGGGACTCCTCCATGTTAAGCACAACAACAATCTCTATGGCCCTGACATTCCACTTTTACGCTTCTATGTCAAGCACGAGACTGAGAACCGTTTGAGGATACACATCACAGACGCAAAGAAAAAAAGGTGGGAGGTTCCTTACAACCTTTTGCCAAGGGATCAACCACCAGTTCTGAAGCAAAACATTGTGTTGTCGAGGAAGCAGAACCTAATATCAGTGTCAGAGACAGAGTACTCTGGCTCTGAACTTGTCTTCAGCTACACTGCTGACCCATTTAGCTTTGCTGTGAAAAGGAAGTCAAATGGAGATACCCTGTTTGACTCAAATTGTAATGAGTTTAACGCGTTGGTCTTCAAGGACCAGTACTTGGAAATCTCTACCAAATTGCCCAAAGATGCTTCTTTGTATGGTTTGGGAGAGAACACACAGGCACACGGGATTAAGCTGTATCCCAATGACCCTTACACTTTGTATACCACTGACGTATCAGCCATTAATCTCAACACTGATTTATATGGGGCACACCCCATGTACATGGATCTAAGAAAGAAAGGTGGCAAACCTTATGCACATGGTGTTCTGTTGCTGAATAGCAATGGAATGGATGTGTTCTACCGAGGAACGTCTCTCACGTACAAGATTATTGGAGGGGTGCTCGATTTTTACTTCTTTACTGGACCCACGCCTCTAAATGTTGTTGATCAGTACACTTCCTTAATTGGCAGACCAGCTCCAATGCCTTACTGGGCCTTTGGATTCCACCAATGCAGATGGGGCTATCACAACCTATCTGTAGTAGAAGATGTTGTCGAGAATTACAAGAAGGCTAAAATTCCACTTGATGTGATATGGAATGATGATGATCACATGGATGGCCACAAGGACTTCACACTGAATCCAATTAACTACCCTCATTCCAAGCTTTTAAACTTCCTGGACAGAATACATAACATTGGCATGAAATACATTGTAATCATTGATCCAGGAATTGCTGTTAACTCCAGTTATGGTGTATATCAAAGGGGTATGGCTAATGATGTTTTTATCAAGTATGAAGGTGAACCCTTCTTGGCTCAAGTTTGGCCAGGAGCAGTGTATTTTCCAGATTTTCTCAATCCAAAAACAGTTTCCTGGTGGGCTGATGAGATCCGTCGCTTCCATGAACTAGTCCCTGTTGATGGCCTATGGATTGATATGAATGAAGCTTCAAATTTCTGCTCTGGAAAGTGCACAATTCCTAAGGGAAAGGTGTGCCCAAGTGGAACAGGACCTGGGTGGATATGTTGCTTAGATTGCAAAAACATCACGAGCACACGGTGGGATGATCCTCCCTACAAAATTAACGCTTCAGGAGTACAGGCTCCAATAGGTTTCAAAACTATAGCCACTAGTGCAGTGCATTATAATGGTGTTTTGGAGTATGATGTTCACAGCCTTTACGGTTTCTCTCAAGCCATTGCTACTCACAAGGCCCTTCAAGGGCTTCAAGGAAAACGGCCTTTCATTTTGTCCCGCTCCACTTTTGTGGGTTCAGGCCAATATGCTGCACACTGGACTGGTGATAACAAAGGCACATGGGAGGACTTAAGGTACTCAATATCCACAATGCTCAATTTTGGAATATTTGGGGTGCCAATGGTTGGTTCAGATATATGTGGTTTCTATCCAGCACCCACTGAAGAGCTTTGCAATCGGTGGATTGAAGTTGGTGCCTTCTACCCTTTCTCAAGGGATCATGCAAACTACTACTCCCCTAGACAGGAGCTTTACCAATGGGAATCAGTAGCTGAGTCTGCTAGAAATGCTTTAGGTATGAGGTATAAGCTCCTCCCATATCTGTACACCTTGAACTATGAGGCACATATTAGTGGAGCCCCAATTGCAAGGCCTCTTTTCTTCTCTTTTCCAACATACACTGAATGTTATGGCCTCAGCACTCAGTTCTTATTAGGGAGCAGTCTAATGATTTCCCCTGTGCTTGAGCAAGGAAAAACACAAGTGTCTGCACTCTTCCCTCCTGGAACCTGGTATAGTTTGTTTGATTTAACACAGACCATTGTTTCCAAAGATGGAAACTATGTTACCCTTGATGCACCTTTGCATGTGGTCAATGTGCATTTGTATCAGAATACAATTCTTCCAATGCAACAGGGAGGAATGGTATCTAAGGAAGCTAGGATGACACCCTTCAGCCTCATTGTGTCCTTCCCTGCTGGTGCAACTGAAGGAGAAGCCAAAGGGAACCTATTCCTTGATAATGATGAGCTGCCAGAAATGAAGCTTGGAAATGGCTATTCAACCTACATTGATTTCCATGCAACTGTCAAAGAAGGAAGCGTGAAAGTTTGGTCAGAAGTTCAAGAGGGCAGGTTTGCTTTAGATAAAGGTTGGGTTATTGACACAATAAATGTGTTGGGATTAAACCGAAATGGAGCACTACCTAAAATTGAGATTGATGGAGAACCACCAATGAGTGTGTCAAATGAGCAAGTTAGTACAACTCAACAAAAGTACTTGTTTGGGCAGGCGCAGGGAGAAGGAGATAAGATATTGATGGTACGGTTGAAGGGCTTGAATATCCCTGTAGGTAAAAATTTTGCTGTGACCTGGAAGATGGGATCATAAGTTGAGATTGCTTCCCCTTTATTGAGACTTTGTAACTTTCTTTAATGTTTTCTATAAATCTCATTAGTGTTGCGGAAGGAGAGATGAGCTAGAATTAAGCTCGTCCTTTTCCATACTAAAAGACGCTTTTAGATTACGCTGCCACTCAAAGTTATGTTGCATCATGAGTGAACCAAATCAAGGATTTTTTTTAGATTAGGTGATGAGTAAATCCAAACTCAATCCTTTGTGGGTTGGATGATAAGTTCGGTCGGTTGAATCCGAGACTTAACCCAACTTAAC 3147 0.4261 MDSSVTLFLSALLLTCFLNVAAEETTSSQKFAQGYRLLTIKDTPDGALLGLLHVKHNNNLYGPDIPLLRFYVKHETENRLRIHITDAKKKRWEVPYNLLPRDQPPVLKQNIVLSRKQNLISVSETEYSGSELVFSYTADPFSFAVKRKSNGDTLFDSNCNEFNALVFKDQYLEISTKLPKDASLYGLGENTQAHGIKLYPNDPYTLYTTDVSAINLNTDLYGAHPMYMDLRKKGGKPYAHGVLLLNSNGMDVFYRGTSLTYKIIGGVLDFYFFTGPTPLNVVDQYTSLIGRPAPMPYWAFGFHQCRWGYHNLSVVEDVVENYKKAKIPLDVIWNDDDHMDGHKDFTLNPINYPHSKLLNFLDRIHNIGMKYIVIIDPGIAVNSSYGVYQRGMANDVFIKYEGEPFLAQVWPGAVYFPDFLNPKTVSWWADEIRRFHELVPVDGLWIDMNEASNFCSGKCTIPKGKVCPSGTGPGWICCLDCKNITSTRWDDPPYKINASGVQAPIGFKTIATSAVHYNGVLEYDVHSLYGFSQAIATHKALQGLQGKRPFILSRSTFVGSGQYAAHWTGDNKGTWEDLRYSISTMLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSPRQELYQWESVAESARNALGMRYKLLPYLYTLNYEAHISGAPIARPLFFSFPTYTECYGLSTQFLLGSSLMISPVLEQGKTQVSALFPPGTWYSLFDLTQTIVSKDGNYVTLDAPLHVVNVHLYQNTILPMQQGGMVSKEARMTPFSLIVSFPAGATEGEAKGNLFLDNDELPEMKLGNGYSTYIDFHATVKEGSVKVWSEVQEGRFALDKGWVIDTINVLGLNRNGALPKIEIDGEPPMSVSNEQVSTTQQKYLFGQAQGEGDKILMVRLKGLNIPVGKNFAVTWKMGS 923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00641 923 CDD GH31_MGAM_SI_GAA 290 670 - -
Pste4g00641 923 CDD GH31_N 172 290 - -
Pste4g00641 923 Pfam Galactose mutarotase-like 182 250 IPR025887 -
Pste4g00641 923 ProSitePatterns Glycosyl hydrolases family 31 active site. 443 450 IPR030458 -
Pste4g00641 923 FunFam Alpha-glucosidase 1 658 758 - -
Pste4g00641 923 Gene3D - 658 757 IPR013780 -
Pste4g00641 923 Pfam Glycosyl hydrolases family 31 271 762 IPR000322 GO:0004553|GO:0005975
Pste4g00641 923 Pfam N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase 52 180 IPR031727 -
Pste4g00641 923 SUPERFAMILY Glycosyl hydrolase domain 675 755 - -
Pste4g00641 923 Gene3D glycosyl hydrolase (family 31) 29 291 - -
Pste4g00641 923 FunFam Maltase-glucoamylase, intestinal 292 657 - -
Pste4g00641 923 Gene3D - 760 923 IPR013780 -
Pste4g00641 923 SUPERFAMILY Galactose mutarotase-like 33 278 IPR011013 GO:0003824|GO:0005975|GO:0030246
Pste4g00641 923 PANTHER ALPHA-GLUCOSIDASE 33 869 - -
Pste4g00641 923 SUPERFAMILY (Trans)glycosidases 281 673 IPR017853 -
Pste4g00641 923 Gene3D Glycosidases 292 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00641 Pste-Chr4 4874363 4879114 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00641 25 922 Glycoside Hydrolase AT1G68560 74.388 0.0 1440
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g00641 4 4874363 4879114 Pste4g00641 4 4874363 4879114 ECH