Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00617 TGTCATTGTAGGTCAGATCCTCGAACCTGATCCAATACGAAACCTCCGCGCGTGCTACAACCGTTCGCTACTCTGCCATTGTAGCTTCGTATTCAAGCACGCAACAAACAAACCCTAACCCTAACCCCAACCCCAACCCCTTATCCGATCATGGCCACCGATGCCCGTGACTCTCGTCGCAAGCATCACCGATCATCCTCTCCCGAGGACGTGGACAGATCCTCAAAGCGTCACAAACACCGCCACCGCCACGAGAGCAAAAAGCGCGACGAAGAGATTGAATTCGACGATCGAACAATTTCTGTGGTTCCTTCTCTAACTCCGCACAGACATCTCCCTGATGACGACGATGTGGAGGAAGGAGAGATCCTCGAAGACGACGCTATCGACGGTGAGGTTGGAAAAAAGGAGACGGAGTCTGATGTTGAACCTGGTGAAATCAAGGTGACAGGGGATCGAGATGCTCGATCTGACAATCAAAATTCGGGACAGCTCACTAAAAATTCAGAAACTAGAAATGAGAACATTAGGGATGGTAAATTTATTAGTCCTGCAATCGATGCAGAAAATGATGTTTCTCCTAATCGTTCAAGTGCTGAGACTCAAGATGGAAAGCATTCTCAAGCTCGTAAAGATGGTGTGGGCAATGGTTATTTGGATCCTAAATCTTCCAAAGGGGATAAGTGGCAGAATGGAGAAGTTGGACGTTTTAAATTGAATGAGAAACTGAAAGGTGACTTTGATGATGAAACACTGGAGGCTAACGCCAGGAAAGCATATTACCATAGGAATTCATCCTCTGAAAGTGGAGGAGAAAAATATAGAATCTCAGGAAGTTCTCCTTCCCATGGTAGATATAGAAGTCGATCACGATCAATTGGTCATGCTAGAGACAGGTCTCGTTCTCGCAGTGTCATAGACGAATATACCCATTCCAAGAGAAGGCGCTCTGACTATGACCATGATGAGGAAAGAGTGAGGGCACGTGGAAGGGAGCATGGTCATGGCAGTGTGGTAGATGATAGAAGGGAACAAAGTACCAGATATCACACCCGGGATAGAGATAGGAGTAGGGACAGAGATGTGGATAGAGACTTACAGAGAGAAAAGAAACAAGAGGAAACAAGCAGGGGTAAGGAAATTGAGTGGGAACACAAAAGAGGAAAGGAACGTGAAAGGAGCCGAGAGAGGTATAGAAGGGAGGTAGAAAAAGATAGAAGCAGGGAAAGGGAGGAGGATAGGGACAGGACACAAGAAAAGGAAAGAGATAGGAGCTGGGAGACAGTGTTTGAGAGGGATAGGAGGAGAGAAAAGGAAAGAGATAGAAGTAGGGACAGAACAAGAGGTGGCAAGAGAGATAGAGACTTGGAGAATGAAAGGGATGATAAGAATCGGGAAAGAGATAATATTAAGGAGAGGGAAAGGCGAGATGATAGATATAGGCACAAAGATAGAGACACTGCAAATGGTAAGGATAGGCATCTGCGTCATGAGGATGGTAATGACAATGGAGATAGATATAGAAAACATTCAAGACATGAAGAAAATGAATACTATTGGGAAAGAAAAAGAAATTCTGATAAGCCTATGAAGGTTTATAACTCAATGGGAAGTACTGCTGAAGTGGATGAAAGCAAACTAACTAGCAGTGAAGTTGAACCTGACTTAGAGGAGGATACATTGCAATTACCTGAGCAAGAAGAAGAAGATCTCAACAGGATCAAAGAAGAGAGTAGAAGAAGAAGGGAAGCAATAATGGAGAAATACAAGAAGCAGCATCAGCAAGTAGAGGAAGCAGTTGGAAATGAAGGAAAAGACAAGGATGCTGACATTGCTGAAGCACGCGATAGCAAGAATGATGATGCTGATGATGTGGAGTCATCATTTGCTGTTGGGAAATCTCCTGATAATGTGAATGTTGCTTCTAAGAAGATATCTCTTGCTGGAGGCCTAGGAGAGGGTACTCCAAAGAGTGAAAGGTCAGAGGACAAGTTTTGTGATGATATATTTGGTGAGACACCAACAGGAGTTCGGAAATCAGTAATAATTGAGAGAGTTGGCCTACATGACAATTGGGATGATGCAGAGGGCTATTACAGTTATCGAATTGGCGAAATTCTTGATGGCCGATATGAAGTCACTGCTGCACATGGGAGGGGTGTCTTTTCAACAGTTGTTCGAGCAAAGAATCTAAAGATGGGAAATGGTGAGCCAGAAGAAGTAGCAATAAAAATTATTCGCAGTAATGACACCATGTACAAGGCTGGTATGGATGAATTGGTCATATTGAAGAAATTAGTAGGTGCAGATCCAGATGATAAGCGTCATTGTGTTCGTTTCCTTTCAAGTTTTAGATACAGGAATCATCTTTGTTTAGTTTTTGAATCTCTTAATATGAATCTACGTGAGGTTTTAAAGAAGTTTGGTCGCAATATTGGCCTTAGGCTGACAGCTGTGAGAGCATATGCCAAACAGCTTTTTATTGCTCTGAAGCATCTCCGGAACTGTGGTGTTCTTCATTGTGATATAAAGCCAGATAATATGTTGGTAAATGAGGCCAAAAATGTTTTGAAGCTTTGTGACTTCGGTAATGCCATGTTTGCTGGGAAAAATGAAGTTACACCGTATCTTGTCAGTCGTTTTTATCGTGCCCCAGAAATAATACTTGGCTTGCCGTATGATCATCCATTGGATATTTGGTCTGTAGGCTGTTGTTTGTATGAGTTGTATATAGGGAAGGTTCTTTTCCCAGGGCTTACAAACAATGACATGCTACGGCTTCACATGGAACTGAAGGGCCCTTTTCCAAAGAAGATGCTCCGTAAGGGAGCTTTTACTGAACAGCATTTTGATCAGGATCTGAATTTTCTAGCTACTGAGGAGGATCCTGTAACAAAAAAGGCCATAAAGCGGCTGATTCTCAACATTAAGCCAAAAGATATTGGGACACTCATCACTGGCTCTCCCGGGGAGGATCCGAAAATGTTAGCCAACTTTAAGGACCTTCTGGAAAAAGTGTTTGTCTTGGATCCAGACAAGAGGCTGACAGTGTCACAAGCTCTGAACCACCCTTTCATCACTGGAAAGTGA 3090 0.433 MATDARDSRRKHHRSSSPEDVDRSSKRHKHRHRHESKKRDEEIEFDDRTISVVPSLTPHRHLPDDDDVEEGEILEDDAIDGEVGKKETESDVEPGEIKVTGDRDARSDNQNSGQLTKNSETRNENIRDGKFISPAIDAENDVSPNRSSAETQDGKHSQARKDGVGNGYLDPKSSKGDKWQNGEVGRFKLNEKLKGDFDDETLEANARKAYYHRNSSSESGGEKYRISGSSPSHGRYRSRSRSIGHARDRSRSRSVIDEYTHSKRRRSDYDHDEERVRARGREHGHGSVVDDRREQSTRYHTRDRDRSRDRDVDRDLQREKKQEETSRGKEIEWEHKRGKERERSRERYRREVEKDRSREREEDRDRTQEKERDRSWETVFERDRRREKERDRSRDRTRGGKRDRDLENERDDKNRERDNIKERERRDDRYRHKDRDTANGKDRHLRHEDGNDNGDRYRKHSRHEENEYYWERKRNSDKPMKVYNSMGSTAEVDESKLTSSEVEPDLEEDTLQLPEQEEEDLNRIKEESRRRREAIMEKYKKQHQQVEEAVGNEGKDKDADIAEARDSKNDDADDVESSFAVGKSPDNVNVASKKISLAGGLGEGTPKSERSEDKFCDDIFGETPTGVRKSVIIERVGLHDNWDDAEGYYSYRIGEILDGRYEVTAAHGRGVFSTVVRAKNLKMGNGEPEEVAIKIIRSNDTMYKAGMDELVILKKLVGADPDDKRHCVRFLSSFRYRNHLCLVFESLNMNLREVLKKFGRNIGLRLTAVRAYAKQLFIALKHLRNCGVLHCDIKPDNMLVNEAKNVLKLCDFGNAMFAGKNEVTPYLVSRFYRAPEIILGLPYDHPLDIWSVGCCLYELYIGKVLFPGLTNNDMLRLHMELKGPFPKKMLRKGAFTEQHFDQDLNFLATEEDPVTKKAIKRLILNIKPKDIGTLITGSPGEDPKMLANFKDLLEKVFVLDPDKRLTVSQALNHPFITGK 979
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00617 979 Coils Coil 529 549 - -
Pste4g00617 979 Coils Coil 403 426 - -
Pste4g00617 979 ProSiteProfiles Protein kinase domain profile. 661 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00617 979 CDD STKc_PRP4 660 976 IPR044092 GO:0004674|GO:0006468|GO:0045292
Pste4g00617 979 FunFam serine/threonine-protein kinase PRP4 homolog 631 720 - -
Pste4g00617 979 MobiDBLite consensus disorder prediction 78 105 - -
Pste4g00617 979 MobiDBLite consensus disorder prediction 241 479 - -
Pste4g00617 979 MobiDBLite consensus disorder prediction 1 184 - -
Pste4g00617 979 ProSitePatterns Serine/Threonine protein kinases active-site signature. 788 800 IPR008271 GO:0004672|GO:0006468
Pste4g00617 979 SUPERFAMILY Protein kinase-like (PK-like) 648 978 IPR011009 -
Pste4g00617 979 MobiDBLite consensus disorder prediction 210 237 - -
Pste4g00617 979 Pfam Protein kinase domain 663 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00617 979 Gene3D Phosphorylase Kinase; domain 1 630 720 - -
Pste4g00617 979 MobiDBLite consensus disorder prediction 516 559 - -
Pste4g00617 979 Gene3D Transferase(Phosphotransferase) domain 1 721 977 - -
Pste4g00617 979 MobiDBLite consensus disorder prediction 564 583 - -
Pste4g00617 979 PANTHER DUAL SPECIFICITY PROTEIN KINASE 370 977 - -
Pste4g00617 979 MobiDBLite consensus disorder prediction 106 120 - -
Pste4g00617 979 FunFam Serine/threonine-protein kinase PRP4 homolog 721 977 - -
Pste4g00617 979 SMART serkin_6 661 976 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste4g00617 979 MobiDBLite consensus disorder prediction 1 25 - -
Pste4g00617 979 MobiDBLite consensus disorder prediction 209 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00617 Pste-Chr4 4703791 4710979 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00617 657 978 MAP Kinase Gene Family AT2G18170 31.250 3.36e-26 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Pste4g00617 Pkinase 2.2e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g00617 4 4703791 4710979 Pste4g00617 4 4703791 4710979 ECH