Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00601 CTTAGAAAACATGCAAAGCTTCAACATAACCGAATCGGAATCAACCTCCCCACTCTATTCTCATTCTTCCTTCTTTCACAGCGGAAATGACACCAGCCGAAATCCAACGCATTTCTCGGATCTTCACCATTCTTTTCGACAACACCATGCTCTTGATTTAAGCTCAAGCTCTGTGTTTGGTGCAAAGTCGAGCAATGTGGCTGTTGTTGCAACCAACTTGCAGCGTGGGACATTCAACACGAACCTTGGATGTGCAGAGTTTGCTTCGACAGTTGCAGGGTGCATTGAGACAGAGCGGCAACCCATGTTTCAGAGAGGAACCACTAACGCCACCATGCCCATTGGGAACCAGAATATTGACAATTGGGCAGATGATAACCAACATACTGAAGATACTTGCACAGATATTGACACAGATGATAAAAACCAATGTTTCTCGACCGTGTCTTGGTGCAATGGAGTTGGGGACGGGGCACTTGTAGTTGTGGACTCCCAGGATCAAAGTAAGACTAAAGTTAAAAGTGAAGAGCTGAAGGTTGTTAGCTACATGCATCAAAGCCTTGTTCATATCAGTTCGTGTTTCATTGCTGATTTCTTTATTTTTGTGGATGCCTTCTTTAGACTGCTAGCTCAGAATCGGGAAGCTGCAAGGAAGAGTCGGTTGAGGAAGAAGGCATATGTGCAACAATTGGAGAACAGTCGAGTTAGGCTTGCACAATTAGAGCAAGAACTTCAACGGGCACGTCAGCAGGGAGTATTTATTGCAACTGGAATCACTGGGGATCGCAGTCATTCTGCAGCTGGAAATGGTGCATTGGCATTTGACATGGACTATGCCCAATGGGTTGATGAGCATCAACGGCTGATCAACGACTTAAGATCAGCTATAAATTCTCAAATGGGTGATAATGAACTTCATGTTCTTGTAGATGGAGTCATGTTACATTATGATGAGTTATTTAGGCTGAAAGGCGTAGGAGCAAAGGCTGATGTATTCCACATACTTTCTGGGATGTGGAAGACACCTGCCGAAAGATGCTTCATATGGCTGGGTGGCTTTCGTTCATCTGAACTTCTCAAGATAGTTAGAAACCAGCTTGAGCCGTTAACCGAACAACAGTCAATGGGGATTTACAACCTGCAGCAGTCCTCCCAGCAGGCTGAGGATGCATTATCACAAGGCATGGAAGCATTGCAGCAGTCACTTTCAGAGACACTTTCCTCCTCCTCTTTAGGGCCTTCTGGTTCTGGAAATGTTGCTGAGTACATGTGCCAAATGGCTATTGCTTTGGGCAAGCTTGCCACACTAGAGAGTTTCCTTCATCAGGCTGACCTCTTGAGGCAACAAACTCTGCAACAGATGCGTCGAATTTTGACCACATTCCAAGCTGCTCGTGCTCTCCTTGTCATAAATGATTACGTTTCACGACTTAGAGCTCTTAATTCACTATGGTTAGCATGCCCTAGAGAAACAGAGAATTGCCTTAAAACAGTTATCACAAGTTTCTCTGATCTCCCCTATAATGATGGTAACATACCAACA 1543 0.4472 MQSFNITESESTSPLYSHSSFFHSGNDTSRNPTHFSDLHHSFRQHHALDLSSSSVFGAKSSNVAVVATNLQRGTFNTNLGCAEFASTVAGCIETERQPMFQRGTTNATMPIGNQNIDNWADDNQHTEDTCTDIDTDDKNQCFSTVSWCNGVGDGALVVVDSQDQSKTKVKSEELKVVSYMHQSLVHISSCFIADFFIFVDAFFRLLAQNREAARKSRLRKKAYVQQLENSRVRLAQLEQELQRARQQGVFIATGITGDRSHSAAGNGALAFDMDYAQWVDEHQRLINDLRSAINSQMGDNELHVLVDGVMLHYDELFRLKGVGAKADVFHILSGMWKTPAERCFIWLGGFRSSELLKIVRNQLEPLTEQQSMGIYNLQQSSQQAEDALSQGMEALQQSLSETLSSSSLGPSGSGNVAEYMCQMAIALGKLATLESFLHQADLLRQQTLQQMRRILTTFQAARALLVINDYVSRLRALNSLWLACPRETENCLKTVITSFSDLPYNDGNIPT 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00601 511 PANTHER TRANSCRIPTION FACTOR TGA9 107 487 - -
Pste4g00601 511 Gene3D - 204 247 - -
Pste4g00601 511 SUPERFAMILY Leucine zipper domain 204 244 IPR046347 GO:0003700|GO:0006355
Pste4g00601 511 FunFam BZIP family transcription factor 201 249 - -
Pste4g00601 511 Pfam Seed dormancy control 286 360 IPR025422 GO:0006351|GO:0043565
Pste4g00601 511 CDD bZIP_HBP1b-like 204 253 - -
Pste4g00601 511 Coils Coil 220 247 - -
Pste4g00601 511 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 204 219 IPR004827 GO:0003700|GO:0006355
Pste4g00601 511 ProSiteProfiles DOG1 domain profile. 268 484 IPR025422 GO:0006351|GO:0043565
Pste4g00601 511 SMART brlzneu 200 268 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00601 Pste-Chr4 4596865 4601409 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00601 12 487 bZIP Transcription Factor Family AT1G68640 52.342 5.46e-152 440
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g00601 4 4596865 4601409 Pste4g00601 4 4596865 4601409 ECH