Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste4g00412 CCTCTTCTAATCTTCTCCTGTTGTTCTCATTCATATTCTTAGGCTTAAAGTATACTCTCTTCTTTGCCAAAAAAGAAATTCCCTTTGACAAACAAAACTCAAAGCCAGAGTCTTTTTTATTTTCAGCATTTGCATTCTTTGTTTTCTTCCAATTTGGGTATTCTCCTCTCAAAAGTTTCAAAGAGTTCCCCCAAATCATGGCAGATCAAACTCCCGGTTCAGGAACCGTTTCTGTTGAAGCTTCTCCAAATGAAAGAAGTAAACTTCCAAACTTTTTGCTATCTGTGAGACTTAAGTATGTCAAGCTTGGGTACCACTACTTAATCTCCAATGCTATGTACCTTTTGCTCGTACCCCTTCTTGGGGTAGCTTCTGCTCATCTGTCAACAATCTCTTACCAAGATGTTGTTCAGCTGTGGGAAAATCTCAAGTTCAATCTTGTCTCAGTGACTATATGTTCTTGTCTTATAGTATTCCTTGTCACCTTTTACTTCATGAGCCGTCCAAGGGGTGTTTACTTGGTGGATTTTGCTTGTTACAAGCCAGAGCCAGAGTGCACTTGCACAAGGGAGATTTTCATGGACAGGTCTGCGGAAACTGGCGTATTTTCAGAGGAGAACTTGGCCTTTCAGAAGAAGATTCTTGAGAGGTCTGGTTTGGGGCAGAAGACTTACTTGCCTCCAGCTATCTTGAGTGTCCCACCAAACCCGTGTATGGCTGAAGCAAGGAAAGAGGCGGAGCAAGTGATGTTTGGAGCAATTGACCAGCTTCTGGCAAAAACTAGGGTGAAGGCTAAGGATATTGGGATTTTGGTGGTGAATTGCAGCTTGTTCAATCCCACTCCATCTCTCTCTGCAATGATTGTCAACCACTACAAGTTGAGAGGGAATATCCAAAGTTATAATCTTGGTGGCATGGGTTGCAGTGCTGGCCTTATCTCCATAGACCTTGCCAAGCAGCTCCTCCAGGTTCATCCAAACTCTTACGCCTTAGTGGTGAGCATGGAGAACATAACACTCAACTGGTATTTTGGCAACAACAGATCAATGCTAGTCTCAAATTGTCTCTTCAGAATGGGTGGAGCTGCAGTCCTTCTCTCCAACAGGTCTTCAGACCGCAGAAGAGCCAAATACCAATTGATCCATACAGTGCGTACTCATAAGGGTGCAGATGACAAATCTTATGGTTGTGTCTTCCAAGAAGAAGATGAGAAGAAAACAATTGGTGTGGCACTCTCAAAGGACTTAATGGCTGTTGCTGGAGAAGCCCTCAAGACCAATATCACAACACTTGGCCCATTAGTCCTTCCCATGTCAGAGCAGCTATTGTTTTTTGCAACTTTGGTGGCTAGAAAAGTGTTCAAGATGAAAATAAAGCCATACATACCAGACTTTAAGCTAGCTTTTGAGCACTTCTGCATCCATGCTGGAGGAAGAGCAGTGTTGGATGAGTTGGAGAAAAATCTAGAGCTCACTGATTGGCACATGGAGCCTTCAAGAATGACACTAAACAGGTTTGGCAACACTTCTAGCAGCTCCTTGTGGTATGAATTGGCCTACACTGAAGCTAAAGGGAGGATCAGGAAGGGTGACAGGACTTGGCAGATTGCGTTTGGTTCTGGATTCAAGTGTAACAGTGCTGTGTGGCGTGCATTGAGGACCATTAATCCAGCAAAGGAGAAAAATCCTTGGATGGATGAGATTCACGAGTTCCCTGTTCATGTGCCTAGAGTGGCAACCATTCGTTCCGGTTCCTAAGTTAGACCTCTTGCTTTTTTTTAGGAAGAGGCTATCTTAAAGGAAGAAATTTACTAAGTTTTTCATAGCTAATCTTAGGAGAGGTGCAAATTCAGAAGAGTTTAATCCATGCAGATTTGCTGGTTTGGCTTTCATGTTGTTCTAGCTAGTGTGTTCAAGTTGTAAGAGTGTGCATATAATTATTGTCAAATGAAACATTTACTACACGATTGTTCATAAAATGTATTAATTGACTATTGATTTTTTTAAGTTGCATAATGAAATGAGGAACTGTATTTGGTCATGAATA 2046 0.4203 MADQTPGSGTVSVEASPNERSKLPNFLLSVRLKYVKLGYHYLISNAMYLLLVPLLGVASAHLSTISYQDVVQLWENLKFNLVSVTICSCLIVFLVTFYFMSRPRGVYLVDFACYKPEPECTCTREIFMDRSAETGVFSEENLAFQKKILERSGLGQKTYLPPAILSVPPNPCMAEARKEAEQVMFGAIDQLLAKTRVKAKDIGILVVNCSLFNPTPSLSAMIVNHYKLRGNIQSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLNWYFGNNRSMLVSNCLFRMGGAAVLLSNRSSDRRRAKYQLIHTVRTHKGADDKSYGCVFQEEDEKKTIGVALSKDLMAVAGEALKTNITTLGPLVLPMSEQLLFFATLVARKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELTDWHMEPSRMTLNRFGNTSSSSLWYELAYTEAKGRIRKGDRTWQIAFGSGFKCNSAVWRALRTINPAKEKNPWMDEIHEFPVHVPRVATIRSGS 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste4g00412 519 PANTHER 3-KETOACYL-COA SYNTHASE 77 508 IPR012392 GO:0006633|GO:0016020|GO:0016747
Pste4g00412 519 PIRSF Very_long_ch_3-ktacl-CoA_syn 25 519 IPR012392 GO:0006633|GO:0016020|GO:0016747
Pste4g00412 519 FunFam 3-ketoacyl-CoA synthase 116 485 - -
Pste4g00412 519 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 404 484 IPR013747 -
Pste4g00412 519 CDD CHS_like 91 483 - -
Pste4g00412 519 Gene3D - 118 485 IPR016039 GO:0016746
Pste4g00412 519 Pfam FAE1/Type III polyketide synthase-like protein 98 387 IPR013601 GO:0006633|GO:0016020|GO:0016747
Pste4g00412 519 SUPERFAMILY Thiolase-like 92 310 IPR016039 GO:0016746
Pste4g00412 519 SUPERFAMILY Thiolase-like 315 485 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste4g00412 Pste-Chr4 3147413 3150139 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste4g00412 23 515 Miscellaneous Gene Families AT2G26640 77.890 0.0 829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste4g00412 4 3147413 3150139 Pste4g00412 4 3147413 3150139 ECH