Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g04135 TTTCAAGAGCATAGAGCCAACAGGGTGCAATTATATGAGAACAAAAATCACTTCTTTTTTTATGAATGCACTGTTTGGTGATTAATTAGGAGTTTGATTGTGACAATGGATCAAGATCAAAGAGAAGGGTCTTCTTCTTCTTACTATCACGTTCTTGGTGTTAGTGTTGATTCTAACGTGGATGAGATTAGACGTGCTTATAGGAAACTTGCAATGCAATGGCATCCTGATAAGTGGGCAAAGACTCCTTCTTTATTGGGTGAGGCTAAGCGAAAATTCCAGCAGATTCAAGAAGCCTATTCAGTGCTGTCTGACAGTAAGAAAAGAACTGTGTATGATGCGGGCTTGTATGATCCGAAAGAGGAAGAGGATGAGGGCTTTTCTGATTTTGTGGAAGAAATGTTGTCTCTTATGGCTCAAGTGAGAAGAGAGGAAAAAAATTATGGTTTGGAAGAGTTGCAGGACATGTTAATGGAAATGGCAAAAGGGGTGGAGACTCCTTCAGTGTACTGTGGGGTGCCCTCTGTGATTGGTGAATCTGGGTGCTTAAAGAGAACACGGTTTGAGTCTTTTGACACAAGCATGATGGAGAATAAGGGGTCACATTTTCAAGTACCTGATCTTAATCTCTACTTTAGTTAACCAGTTCTTGCCGCTGCTGTCTTTTTTAAAGAAAAGAAAGCTAATCTGTATATTCGTATCAGAATTTTCATTAAATTTTTAGACATGGATAAGAAGCAGAAAGTGAGGAGTTTCAACATCTGGACCATGCATTTATCTGTACATATTCTTCTATGGTGCTAAATTTGTAAAGTTTAAGTGTCAGTTATTAGCACTTTTTTCTCAGTTTCTCTACTTGTAAATGATATGGTCTGTGATGGGAGAATAGGAAGAGAAACCAGTGATTATATAATCTAGAAATTATGCTGAGTAAAGA 937 0.3789 MDQDQREGSSSSYYHVLGVSVDSNVDEIRRAYRKLAMQWHPDKWAKTPSLLGEAKRKFQQIQEAYSVLSDSKKRTVYDAGLYDPKEEEDEGFSDFVEEMLSLMAQVRREEKNYGLEELQDMLMEMAKGVETPSVYCGVPSVIGESGCLKRTRFESFDTSMMENKGSHFQVPDLNLYFS 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g04135 178 CDD DnaJ 13 70 IPR001623 -
Pste3g04135 178 PRINTS DnaJ domain signature 149 168 IPR001623 -
Pste3g04135 178 PRINTS DnaJ domain signature 53 73 IPR001623 -
Pste3g04135 178 PRINTS DnaJ domain signature 32 47 IPR001623 -
Pste3g04135 178 PRINTS DnaJ domain signature 14 32 IPR001623 -
Pste3g04135 178 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Pste3g04135 178 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Pste3g04135 178 Pfam DnaJ domain 13 78 IPR001623 -
Pste3g04135 178 SUPERFAMILY Chaperone J-domain 11 84 IPR036869 -
Pste3g04135 178 PANTHER PUTATIVE, EXPRESSED-RELATED 6 133 - -
Pste3g04135 178 SMART dnaj_3 11 73 IPR001623 -
Pste3g04135 178 Gene3D DnaJ domain 1 100 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g04135 Pste-Chr3 36801194 36802755 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g04135 13 79 C2H2 Transcription Factor Family AT1G74250 51.471 1.16e-14 69.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g04135 3 36801194 36802755 Pste3g04135 3 36801194 36802755 ECH