Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g04118 CGCACGCACAAATGAAAATCGAAAAATTCCAAAATAATTGTATATTTTAATTTTTTTCTGGCACCAACCGAAAAAACAATAAGAATAAGAATTAAGAAGTAATATTTTCCGTTCTGAGAGATTCCATCGCATTACACTTCACTCCACCAAACCGAAGATTGATTCCTCTCACAAGCAACGAGGTTTCGAACTTTCGGCGATAGTGTTGCTGAATCCTTGATTGATCGCGAAAACGAAAATGGATGATGAAGTTGTTCAGCGAGTGTTCCATGAAGGAGGACGCGATTATTTCCAACAACAGCCTTCAACTTCTTCGTCTTATTCTTCCATCCTTCAATCTCTCCCTCTCCACGTGTCTTTTGATCATGGATATTATTTGTTGGTAAAATCTATCCAAGAACTCCGAGAGAAAAAGGATGGCCTTGTTACTGTTGGCATTGGTGGTCCAAGTGGATCTGGTAAAACAAGCTTAGCAGAAAAGGTGGCATCTGTTATTGGTTGTACTGTTATATCAATGGAGAATTATCGTGAAGGAGTTGATGAAGGGAATGATGTTGATTCTATAGATTTTGATACCCTGATCAAGAATCTTGAGGATTTGACTAAAGGCAATGATACATTAATCCCAGAGTTTGACTTTCAGCAAAAGAGGCGTGTTGGCTGTAAAGCAATAAAGAGTGCTTCATCTGGGGTGGTCATAGTTGATGGCACATATGCATTGCATGCAAAACTGCGGTCTTTACTGGATATTCGCGTTGCTGTGGTTGGTGGTGTTCATTTTAGCCTGCTTTCTAAAGTTCGCTATGACATTGGAGATTCTTGTTCACTGGATTACCTTATAGATAGCATTTTTCCATTATTTAGGAAACACATTGAGCCAGATCTTCATCATGTACAGATCAGAATTAACAACAGCTTTGTCTCATCATTCAGAGAGGCAATCTACAAGGTTAAATGCAGAAGTGAGTCTTCAGATGGGCATTCAAGTTGTGCTTTTCAAGGAAATGATGCCCAAACAGATAATTTTATTGAAATGTACCTTAGACCACCTTCAGCAAATGAAGAAGCAAGGATAAATGATTGGATCAAAGTGCGGCAGTCTGGAATTAGATATTATTTATCACTTGGAGACCAGCGGATTGTTGACAAAAATTTTATTATCAGGCCTCGAGCTGAATTTGAGGTTGGTCGAATGACATTAGGTGGATTGTTGGCTCTTGGGTACACTGTTGTGGTTAGTTATAAGCGTGCATCCACAACTTTTAATAATGGCAAGGTTTCAATGTCTTCTGAAACCATTGATGTTCTTGGTGAGACATTCATAGTGATGAGAGGAACTAATAGAAAGACTGTCGGAACAGAAGCATTAAGGATGGGAATTAATGGACCTTGGATTACTAAATCATACCTAGAAATGATTCTAGAGAGAAAAGGTGTACCTCGTCTTAGTACTCCGCCACTTGTGTCTAATACAACTGTGGCTGGTAGTCAAGAAACAGTGTTCATTGCACCAAAGCCAATTCGAGTTTCCGCTAACCTTGTTACTGGGATTGAGGATTTACCTCTGCCGTGGACTCGGTCTCCAACAAAATCTAAAATGGAACCTGTTGTGGCTGAATGGCACTTCACATCTGCAGATTCCTCCCAGCCTGACAACTCAGTACTAGATCCTTCATCTTTCAGGGATAGTATTAGGCTTGCTCCAATGCCTGATTCATTTGACTTGGATAGGGGATTGCTTTTGGCAGTTCAAGCAATACAAGCATTGTTGGAGAATAAAGGTGTCCCAATCATAGTTGGAATCGGAGGTCCAAGTGGGTCTGGGAAGACTAGTTTGGCTCATAAAATGGCAAATATAATTGGTTGTGAAGTAGTTTCCCTGGAAAGCTATTATAAACAAGTAAAGGATTTTAAATATGATGATTTCAGCGTACTTGATTTATCTTTGCTATCAAAGAATATTGATGATATTAGAAATGGTCAAAGAACAAAAGTACCTATTTTTGACTTGGAAAGTGGTGCTCGGAGTGGTTTCAAGGAACTTGAAGTTTCTGAAGATTGTGGAGTGATTATATTTGAAGGTGTCTATGCGTTGCATCCTAACATTCGAATATCACTCGACTTGTGGATTGCTGTTGTTGGAGGTGTTCATTCGCATTTGATTTCACGAGTTCAAAGGGATAAAAGTAGAGTGGGATGTTTTATTTCCCAAAATGAGATCATGATGACAGTGTTTCCTATGTTCCAGCAGCTTATTGAACCTCATCTTGTTCATGCACACCTTAAAATTCGAAATGACTTTGATCCTGTGCTTTCTCCTGAGAGTTCATTATTTGTATTGAAGAGTAACAAAAAAGTAGCATATCAAGATATTGTTGCAATTCTTGATTCAGCAAAATTTTGCAGTTCGGTGCAGAAATTTATTGATATTTATATAAGGCTTCCTGGGATCCCCTCTAATGGGCAGTTGAGAGAAAGTGATTGTATTCGAGTCAGAATATGTGAAGGCAGATTTGCATTGCTGATACGGGAGCCTATCAAAGAAGGGAACTTTATCATTCAGCCTAAAGTGGATTTTGATATTAGCATTAGTACGGTTGCTGGTCTTCTTAATCTTGGGTATCAAGCTGTTGCTTATATTGAAGCGTCTGCATTTATCTATCAGGATGGAAAGATTCTAATCGAGGTTGATCATCTACAAGATGTCCCTGGCCCATACATTCAGATAAAGGGTGTTAATAAAGATGCAGTGGCAGCAGCAGGTTCAATGCTTAAATTAGATGGATCATATACTACTAAGAGTTATCTTGAAATAATTTTGGAAAGACTACCGTCAATAGAAAGAACATCTGGCGGGATTCATTCTCAGCAATCAGCAAGGCTGCTAGAGATTGTTGAGTTTATTCAGTCTCAGGGATGTAGCTCTGCTTCAGATTCCTCATCAAGTAGGGTAGTCTCTCCGATTGAGGGGGTTATTGAGGAGATGCAATCAAGGATTAGAAGGCTTGAAAGGTGGCTAGCTATAAATACGGTTCTATGGACATTTCTGATGTCTGCCCTTGTTGGTTATTCACTGTACCAAAGGAAGCGTCAATAATGGTTTTTGGGAATTTTCAGGATCATGTATTGCCGTTCTTGTTTAGTTACCTCCGTATACCGGGCCCACCCAATTTTTAAATGGCGAGTGCATAAACAGCGCTAATCCCTCAACTATAGGTTCCATTTAGAATATATTGCTGTTCATCATTTCAAAGGTTAATTGTTGATTAATTCTTACGTACATATAATTTGGTAATCAAAACTAAGAAACTATTATGATTCATTGATTCCCACACACCTAAAGACGTTAATGACCACAAGCAAGAGATGCATGGGCAATGGCATTCTGCAACTGGCATTGTTGGTGATAGGAGACACAGATGACAGATTGTAGCCGGTTAATGGTCAAAATTATTGAGATGAGGAACTGGGCTATAGAACCATGAACCGTCATTGGTCAAAATTACAAGTTTTAAAAATTAACTTAATGGTTGCGATCTTATCAAATAATAACCGGTTTGAGGATCTATACAAAGAGGACATTTACTCGATATTAAGCTCCATATAATGTGTTTGCTTTATATTTTGTTGTCACAAATTTCACCGGCCACCACCGATATAAGTTTTGACGAAGGATATATTTTCGTTTAGGGTTTATAACATAAACATAGGCAAGCCTGTACCTTTTTTAGCTTTTCTTTTTATCCGTTTCTTTTAGCACTCTCATTTACTATTTACATCTCATAGCATTTAAAATAATTTGAAAAATTTCAACATATCCTCAACTCATTTTAATCTGCATTTAAAGTGTAT 3852 0.3821 MDDEVVQRVFHEGGRDYFQQQPSTSSSYSSILQSLPLHVSFDHGYYLLVKSIQELREKKDGLVTVGIGGPSGSGKTSLAEKVASVIGCTVISMENYREGVDEGNDVDSIDFDTLIKNLEDLTKGNDTLIPEFDFQQKRRVGCKAIKSASSGVVIVDGTYALHAKLRSLLDIRVAVVGGVHFSLLSKVRYDIGDSCSLDYLIDSIFPLFRKHIEPDLHHVQIRINNSFVSSFREAIYKVKCRSESSDGHSSCAFQGNDAQTDNFIEMYLRPPSANEEARINDWIKVRQSGIRYYLSLGDQRIVDKNFIIRPRAEFEVGRMTLGGLLALGYTVVVSYKRASTTFNNGKVSMSSETIDVLGETFIVMRGTNRKTVGTEALRMGINGPWITKSYLEMILERKGVPRLSTPPLVSNTTVAGSQETVFIAPKPIRVSANLVTGIEDLPLPWTRSPTKSKMEPVVAEWHFTSADSSQPDNSVLDPSSFRDSIRLAPMPDSFDLDRGLLLAVQAIQALLENKGVPIIVGIGGPSGSGKTSLAHKMANIIGCEVVSLESYYKQVKDFKYDDFSVLDLSLLSKNIDDIRNGQRTKVPIFDLESGARSGFKELEVSEDCGVIIFEGVYALHPNIRISLDLWIAVVGGVHSHLISRVQRDKSRVGCFISQNEIMMTVFPMFQQLIEPHLVHAHLKIRNDFDPVLSPESSLFVLKSNKKVAYQDIVAILDSAKFCSSVQKFIDIYIRLPGIPSNGQLRESDCIRVRICEGRFALLIREPIKEGNFIIQPKVDFDISISTVAGLLNLGYQAVAYIEASAFIYQDGKILIEVDHLQDVPGPYIQIKGVNKDAVAAAGSMLKLDGSYTTKSYLEIILERLPSIERTSGGIHSQQSARLLEIVEFIQSQGCSSASDSSSSRVVSPIEGVIEEMQSRIRRLERWLAINTVLWTFLMSALVGYSLYQRKRQ 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g04118 952 SMART AAA_5 516 660 IPR003593 GO:0016887
Pste3g04118 952 SMART AAA_5 61 211 IPR003593 GO:0016887
Pste3g04118 952 PANTHER URIDINE KINASE 10 257 - -
Pste3g04118 952 Gene3D - 516 693 IPR027417 -
Pste3g04118 952 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 505 687 IPR027417 -
Pste3g04118 952 Gene3D - 702 864 - -
Pste3g04118 952 CDD UMPK_like 64 226 - -
Pste3g04118 952 Gene3D - 63 243 IPR027417 -
Pste3g04118 952 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 174 IPR027417 -
Pste3g04118 952 CDD UMPK_like 519 687 - -
Pste3g04118 952 Pfam Phosphoribulokinase / Uridine kinase family 519 684 IPR006083 GO:0005524|GO:0016301
Pste3g04118 952 Pfam Phosphoribulokinase / Uridine kinase family 106 211 IPR006083 GO:0005524|GO:0016301
Pste3g04118 952 PRINTS Uridine kinase signature 517 534 - -
Pste3g04118 952 PRINTS Uridine kinase signature 638 648 - -
Pste3g04118 952 PRINTS Uridine kinase signature 544 555 - -
Pste3g04118 952 SUPERFAMILY CYTH-like phosphatases 712 859 IPR033469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g04118 Pste-Chr3 36408810 36429289 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g04118 512 675 PRT Gene Family AT1G55810 26.404 4.25e-10 61.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g04118 3 36408810 36429289 Pste3g04118 3 36408810 36429289 ECH
Pste3g04118 3 36408810 36429289 Pste6g02757 6 15263599 15274625 PCT