Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g04114 CTAGAACCTTCCACCCCCATCCAGAACCCAAGCTTCTGTCGTTTTAAAAATCGTCACTTGCCCTTCTAAACCCTAAAAATCACACCTTTATTTGCACAAAAGAGGAGAAGAAGATGGCAAAGCGGTTGATTCCCAGCTTCAATCGCATTCTCGTCGAGAAAATTGTCCCTCCTTCCAAAACCAGCGCTGGCATTCTCCTCCCTGAGAAAACCTCCCAGCTTAATTCCGGAAAGGTGGTAGCGGTTGGACCCGGGTCACGTGACAAAGCAGGGAACTTGATTCCGGTGTCTGTGAAGGAAGGTGATCACGTGCTCTTGCCGGAGTACGGTGGCACGCAAATCAAGCTCGATGACAAAGAGTTTCATTTGTTTAGGGACGAGGACATCTTGGGTATTCTGCATGATTGATGTTGCGTGTGTGATGTAATGCATGAAACATGCAAATTCTGTTTTACCTGAGAAATAATTTGTATCTGTTTACGAATGCAACTTGCTACCAACGATTCCGAGGGATTTAATTTAGGAATTTTCCCTGTTTCGTATTCTGAAAATGAGAAATGATGCTTATTATTTGCTATGCAGCTCAAGTCTTTCGTGTTTTTTTTTTTCTTTTGCTTTACAAATTTAAAGCTTTGTTATGATACTGTTTTGTTTACATGCGATTAGAC 667 0.4213 MAKRLIPSFNRILVEKIVPPSKTSAGILLPEKTSQLNSGKVVAVGPGSRDKAGNLIPVSVKEGDHVLLPEYGGTQIKLDDKEFHLFRDEDILGILHD 97
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g04114 97 PRINTS 10kDa chaperonin signature 61 73 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pste3g04114 97 PRINTS 10kDa chaperonin signature 82 95 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pste3g04114 97 PRINTS 10kDa chaperonin signature 5 20 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pste3g04114 97 PRINTS 10kDa chaperonin signature 26 47 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pste3g04114 97 FunFam 10 kDa chaperonin, mitochondrial 1 97 - -
Pste3g04114 97 Pfam Chaperonin 10 Kd subunit 6 94 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pste3g04114 97 SUPERFAMILY GroES-like 3 96 IPR011032 -
Pste3g04114 97 SMART Cpn10_2 4 95 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pste3g04114 97 Gene3D GroES chaperonin 1 97 IPR037124 GO:0006457
Pste3g04114 97 CDD cpn10 4 95 IPR020818 GO:0005524|GO:0006457|GO:0044183
Pste3g04114 97 PANTHER 10 KDA HEAT SHOCK PROTEIN 1 94 IPR020818 GO:0005524|GO:0006457|GO:0044183
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g04114 Pste-Chr3 36323129 36324064 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g04114 3 96 Calmodulin-binding Proteins AT5G20720 36.458 1.17e-11 57.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g04114 3 36323129 36324064 Pste3g04114 3 36323129 36324064 ECH