Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g04102 TTTGTTTCCATCTAAAAATCGTTGCCAACTGTCCAACTTAGATTCGGTTCAAACTTCAAACACATCATGCATTAGTTACTTCTCTTCTCCACCCTCTTCTTCCTTTACCACTCTGCAATCACAAGGTGTGTCTCAATGGACAACTTTCTGGGTCTCATCAAACTTCGTATAAAAAAGGGTACTAATCTCAAAGCTTGTGATACTCGTACCAGTGACCCATATGTCTTTGTCACCATGGCCGAACAGAAACTGAAAACTGATGACACCATGGGTGACGCAGAAATAGACTTAAAGCCATATCTTCAGTGTGTGAAGATGGAGTTGAGCGATCTCCCAGAGGGTCATGTAGTCAAGAGGGTCCAACCAGATAGGACTAATTGTCTTGCTGAAGAGAGCAACTGCATATGGAAAAATGGAAAACTCATGCAGGAGATGAGTTTAAGATTGAGAAATGTTAATTCTGGGGAAATAAATGTGGAAATCGAGTGGCTTCCAGTTTCAGAGGGCTTATCAAAAGTTGAGTTTTAGGTGTGCCTACATGCCTTAACTTTTTGCTGTACTGCCTGTGTTATGATACACATATCATAAGTTGATGTTACTATGTAACTTGAGTGAAAAACTAGAACTTACTGAGTTGCAGAAATATCAAACCTCATCATTAGTTTATATAACGATACATGATCTGTGGTAGCAATCAAGTGTCATTTGATGTGAGTATTAGTGATGATTGTTGGACATTTCTCTACTCTAAAACTTTATTAACATCTA 768 0.3854 MDNFLGLIKLRIKKGTNLKACDTRTSDPYVFVTMAEQKLKTDDTMGDAEIDLKPYLQCVKMELSDLPEGHVVKRVQPDRTNCLAEESNCIWKNGKLMQEMSLRLRNVNSGEINVEIEWLPVSEGLSKVEF 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g04102 130 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 3 41 IPR044562 -
Pste3g04102 130 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2 121 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g04102 Pste-Chr3 36198115 36200146 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g04102 26 127 C2H2 Transcription Factor Family AT1G70790 48.113 1.44e-30 105
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g04102 3 36198115 36200146 Pste3g04102 3 36198115 36200146 ECH
Pste3g04102 3 36198115 36200146 Pste9g01436 9 13773524 13776208 ECH
Pste3g04102 3 36198115 36200146 Pste7g02020 7 18547041 18549455 ECH