LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste3g04078	TCTCCGTCTCCCTCCTCCACTCCCTCTCCCGCTCCCACCCGCACCCTCTCCCCGCCCTCCCTCTCCGCCGCTGACCTCTCATCCTCCGACGACCCCATCGACGACCTCGACTTCATCGACGAAACCCTAGACCCCGCCCCTTCCTCCCCCGCCTCACCCCTCCCCTCTCTTCTTCGACCCCTCTCCGCCGCCCTCCGCCGCTCCTTCCTCTCCTCCTCCTCCCCATCACCGCCGCCGGCGTCTTCCCCTCCCCTCCGCGGCCCCTCCAAGACCGCCTTCGCCTCCGACGACGCCCCCGTCGACTCTTCCATACGCGCCTTGGCCTCGCGCGTGGCCTCACTCGAGCACGCGCTGCTCCTCAAAGACTCCCCTCTCAGAGACCAATGGGGTGACTGGTTCGACAAGAAGAGCGTCTTCCTCAGAAAAGATCGAATGTTCAGATCCAACTTTGACTCCCTTAACCCCCTCAACAACCCCCTTCTCCAAGACCCCGACGCCGCCGCCGCCGCCGCACTCACCAGAACCGACCGCCTCGTCCAGAAATGGTGGATCCATCACTTCAGGAAAGTCCCCTTCCCTGGTGTTAAAAAAATTGGCAATGTCCCCACCAAACTGGGGACAGAGCGCAGAACTCTCAATCATCAAAATAACAACAACAACATCATCAATCATGAGATCATTAAGGAAGAAGTTGCAAGTTCAGTCACTAATGGTGCTGAATTAACCATCCGGAAAGATGCCAACTTTATGGTTGCTGAGGCAGATGGCACTAATGGTGGTGAATTAACCATCTGGAAAGAGGGCAACTTTATGGATGCTGGGGCTGATGGCACTGATGGTGGTGAATTAACCGTTCGGAAAGATGGCAACTTTATTGATTCTGGGGCTCTGGGTTTGAAGAATTCAGGCACTAATGGTTGTCGATTAACCATTCGGGAAGATGTCAACTTTACTGATTCTGGGGCTCAGGGTTTGGAGAGTTCAGGCACTAGTGGTGGTGGATTAACCATTCGGAAAGATGTTAATGTTGTTGATGTTAGGGATGAGGCTTTGAGGAATTCAGGCACTAATGGTGGTGAATTAACAATTCGGAAAGATGCTAATGTTGTTGATGCTAGCGGTGTGGCTTTGAAGAAACATGTGTATGCTGATGGGGATACTTGGGGGTACTACCCTGGACTGCCGCCGCGATTGTCGTTCAACAACTTTATGGATAAGTTTTTCAGGGTGGGGAAGTGTGTGATTAGAGTGTTTATGGTGTGGAATTCGCCGCCTTGGATGTACACTGTTCGGCATCAGCGTGGTCTTGAGAGTTTGCTTTTTCGTCATCCTGATGCTTGTGTTGTTGTGTTCTCGGAGACGGTTGAGCTTGATTTCTTCAAAGATAGCTTTGTTAAGGATGGTTACAAAGTTGCTGTTGCCATGCCTAATCTAGATGAGTTGCTAAAGGGTACGCCTGCTCACATTTTTGCTTCTGTGTGGTTTGAGTGGAAGAAGACGAAGTTTTATTCTACTCATTACAGTGAGCTTGTCCGCCTTGCTGCTCTCTACAAATATGGTGGGATCTATCTAGACACAGATATCATAGTGTTGAAGTCTATTTCTTTCCTTAATAATTCTGTTGGTACGGAGGAGGATCATGGTGCTGCAATTGCTTTGAATGGTGCTGTGATGGCTTTTCAAAGGCACAGTTTGTTCATACAGGAGTGCTTGGAAGAGTTTTACATGACATATGATGATACCAGTTTGAGAGGGAATGGTGCTGATCTGTTGACGAGGGTTGCACAAAAATATTTGGGAGAGGAAAATAAATCTGTGAAGCCCTTGGAGTTGAAAGTAGAACCCTCTTACATCTTCTTCCTCATCAGTTCTCAGAACATAACAAGATACTTTATTGCACCGACAATAGAGACAGAGAAAGCTCAACAAGATGTGCTGCTTGAAAATATCCTGCACAATTCATTGACATTTCATTTCTGGAACAGCTTGACATTTTCTCTCATTCCTGAACCAGATAGCCTTGTGAGTAGGCTTTTGAATTATGCATGTATCCGATGCTTGGAATTACTATGAAATATGAATGCCAGCTTCCACCAATTTTGTCTTGAGTTTCCCATTCAGATTGCAGTCCAGAAGACATCGGCAGGTTCTTGTCCATTGAGTTGTACAATTTTACTGTATGTTAGTGAGATACTCTGGGTGGGTTGAAATCACTACTAAGAAAACCAAGATATACAGAAAACTTTGTAAAGCAAAACTAGCGTTATCTAATAATCATGTATTATTATATTATAATTATAATTATAATGAACAATATAGTATGTATTAGAGATGCATTGTTCATCACTACATGATTTTGGTGTAATTGCAATCAGTATCTAATATTTTTTAGTCAGTAAAGAAGCAGA	2408	0.4647	SPSPSSTPSPAPTRTLSPPSLSAADLSSSDDPIDDLDFIDETLDPAPSSPASPLPSLLRPLSAALRRSFLSSSSPSPPPASSPPLRGPSKTAFASDDAPVDSSIRALASRVASLEHALLLKDSPLRDQWGDWFDKKSVFLRKDRMFRSNFDSLNPLNNPLLQDPDAAAAAALTRTDRLVQKWWIHHFRKVPFPGVKKIGNVPTKLGTERRTLNHQNNNNNIINHEIIKEEVASSVTNGAELTIRKDANFMVAEADGTNGGELTIWKEGNFMDAGADGTDGGELTVRKDGNFIDSGALGLKNSGTNGCRLTIREDVNFTDSGAQGLESSGTSGGGLTIRKDVNVVDVRDEALRNSGTNGGELTIRKDANVVDASGVALKKHVYADGDTWGYYPGLPPRLSFNNFMDKFFRVGKCVIRVFMVWNSPPWMYTVRHQRGLESLLFRHPDACVVVFSETVELDFFKDSFVKDGYKVAVAMPNLDELLKGTPAHIFASVWFEWKKTKFYSTHYSELVRLAALYKYGGIYLDTDIIVLKSISFLNNSVGTEEDHGAAIALNGAVMAFQRHSLFIQECLEEFYMTYDDTSLRGNGADLLTRVAQKYLGEENKSVKPLELKVEPSYIFFLISSQNITRYFIAPTIETEKAQQDVLLENILHNSLTFHFWNSLTFSLIPEPDSLVSRLLNYACIRCLELL	690

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste3g04078	690	Pfam	Alpha 1,4-glycosyltransferase conserved region	559	689	IPR007652	-
	Pste3g04078	690	Pfam	Glycosyltransferase sugar-binding region containing DXD motif	430	545	IPR007577	-
	Pste3g04078	690	Gene3D	-	419	626	-	-
	Pste3g04078	690	MobiDBLite	consensus disorder prediction	1	15	-	-
	Pste3g04078	690	MobiDBLite	consensus disorder prediction	1	97	-	-
	Pste3g04078	690	PANTHER	OS07G0567300 PROTEIN	88	690	IPR044789	-
	Pste3g04078	690	SUPERFAMILY	Nucleotide-diphospho-sugar transferases	383	681	IPR029044	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste3g04078	Pste-Chr3	35696830	35700790	Dispersed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pste3g04078	3	35696830	35700790	Pste3g04078	3	35696830	35700790	ECH