Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03881 GTTCACCATATCATGGTTGATAATTATCCCTTTCCCTACTTTTTCTCTCTCTCAGTCTCCCACTCTGCTTATTCACTCAACCATTTCACATTCAAGCGTAACTCAAGGCGCCACCCTCTCTTTGTCTGCTTATTCTCCTTTCAACGAGAGCAAAAAATGTTGAGTAACTGTGAGAAAATGGTAGTAGTCACTCCTCCAACAGGGTCTAACAAATGGACACAGATAGATGATCACAAGGCCCCTATGGGAAGAGTCATGGAAAAACCAAGTCAAGATCTTCTTCAGCAGCAGCAACAAGCCCTCAAGTGCCCTCGTTGTGACTCTTCAAACACCAAGTTCTGCTACTACAACAACTACAGTTTGTCACAGCCTAGGCACTTTTGCAAAGCCTGCAAGAGATACTGGACAAGAGGTGGAACACTCAGAAACGTTCCCGTTGGTGGAGGTTGCAGAAAAAACAAGCGTGTTAAACGCCCAAACGGTGATACTTCTGCTAACTCATCTCCTCCTTCTTCTTCCACTCCCAGCACCAACTCAAACCCTCCATCACAGCCCCACATCGAAAATATTACTTCTAGTTCTGCCACAAACCATGTCAATATCAATCCTTTGTTTTATGGGCTACCTAATGGTAACGGTTGTGATGTGGTCAATGTTCCTTTCCCAAGGTTTAATCTTCAGTCTCAGCTGAATGCCCTTGGGTTAGGTTTTTCATCTGGGGTTATGTCAAGTGAAGCTAGTGATAATGGGTTTGGTACTACTTCAAGTAATAACAACTTCCTTTCTGCTTATAATTCCATCTTTGGTTCTTCTTCTTCTTCAAGTTGTGCACCCTCAACTCCTGTTATGGCTTCGTTGCTGAGTTCTACTCTTCTGCAACAAAAGTTTATTGGTGGTGGTGGAGTGAAGGGTGATCAAGGTGGCAACAATTTCCAGGGCATGGCTCCACTAGAAGGGTTGCAATTGCAAATGGAAGGGAATAGTAATAATATTGGCTCAAAAGATGTGAAAGTTGAAGGACAAAACAGGTTTGAGTGGAATAATAGTAATAATAGTGGTGCTTGTCAAAACCAGATGGAGCATGTGGGCATGTCTGATCCTAATTCACTTTATTGGAACACTGCAACGGGTTTGGGTGCTTGGAGTGATCAACCTAACATTGGTCCTTCAGTCAGTTCTCTGATCTAGAAAGATGAAGCATCGTTTTCTAAGCTATATATGAAGTCTCTCTCCCTCGTTTAATTAAGGTCATCTTTTGGTTCCTTTAGGCTTAGTTTTGTTTATTTCTGCTACTTTTCTTCTTTTGGGTCAAAGTGGGTTGGGTTTACTACTTACATTGAAAAGACAAAAAAGAAGATACATGAGATGAGAGGAGTTTGGGATCGGAGCGATCATGTCAGCTGCAAGAATTTTACTACTACACACTTCAGCCTGTTAGTTTTATGTGTCAAGGTTGAGGATTTGGTTATTTTGCGCTGAGAGGAACCTCGGATCCTCTTCTCTCATCATGCCTCCATAGTGTTTGTTTCCTGTGGAGATCAAAAGGAGATCCTGTGGTGCAAGTTCTCCACAGTTGAGTAAGTTGGTCTTTGTTAATGTATATACAATGCAATGACATGTCCTCTTTTTGTTGTCTACTTGATGTATTGTGATACTACTTAGATGAGGTGGGGGGGTTTAATTACTTGGTATATGCTGAGATATTGGTTTCATTTTCGTTAACTTTCTCAACAGTTGTTTGAGGCAAGTGGAAGTTGGATAATTATTATTTGGGGTATAATGATGGTATAGGAGAGAGGGTGATTAATTACTTGGATTGGGTGATTAATGTATGTG 1836 0.4134 MVDNYPFPYFFSLSVSHSAYSLNHFTFKRNSRRHPLFVCLFSFQREQKMLSNCEKMVVVTPPTGSNKWTQIDDHKAPMGRVMEKPSQDLLQQQQQALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRVKRPNGDTSANSSPPSSSTPSTNSNPPSQPHIENITSSSATNHVNINPLFYGLPNGNGCDVVNVPFPRFNLQSQLNALGLGFSSGVMSSEASDNGFGTTSSNNNFLSAYNSIFGSSSSSSCAPSTPVMASLLSSTLLQQKFIGGGGVKGDQGGNNFQGMAPLEGLQLQMEGNSNNIGSKDVKVEGQNRFEWNNSNNSGACQNQMEHVGMSDPNSLYWNTATGLGAWSDQPNIGPSVSSLI 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03881 391 ProSitePatterns Zinc finger Dof-type signature. 99 135 IPR003851 GO:0003677|GO:0006355
Pste3g03881 391 MobiDBLite consensus disorder prediction 156 186 - -
Pste3g03881 391 ProSiteProfiles Zinc finger Dof-type profile. 97 151 IPR003851 GO:0003677|GO:0006355
Pste3g03881 391 Pfam Dof domain, zinc finger 95 151 IPR003851 GO:0003677|GO:0006355
Pste3g03881 391 MobiDBLite consensus disorder prediction 142 186 - -
Pste3g03881 391 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 86 279 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03881 Pste-Chr3 31557289 31559315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03881 49 391 C2C2-Dof Transcription Factor Family AT1G28310 38.874 1.60e-40 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pste3g03881 zf-Dof 2.2e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03881 3 31557289 31559315 Pste3g03881 3 31557289 31559315 ECH
Pste3g03881 3 31557289 31559315 Pste2g02021 2 20395452 20396330 PCT