Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03823 ATGGGTTTGAGTTCTAAGCAGGTTTCTAGCAGTGGACTTGATTGGAAGCAGACCTTATTGGAGGCTCAAAACTTGGAACTCCCGAAGCCTAATCTCATGAGGAAACAACAGCAGCAACAAAATCAACCTTCGGAGTCTTTGAAGTGCCCAAGATGTGATTCTACCAACACCAAATTTTGTTACTACAACAACTACAACAAGTCTCAGCCTCGCCATTTCTGCAGGGCTTGCAAGAGGCACTGGACTAAAGGTGGAACTCTACGCAATGTTCCAGTTGGTGGTGGAAGGAAGAACAAGAGGGTCAAGAAATCTATCACTCCAACAACATCTTCCATCAACACTACCACCCCAACAACAATAACTTCTTCTACTTGCACTACCACTGTCACAACCTCAATTGCCAACATGGATGCTATGTTGGCTAGTAGCCGCATGACAATTCAAACTCCTCTTGCAGATGATCAGAAAAACGTGGCTTCCTCTCTCTACCAAGCTCTAATTCGTCCACCACCTTTGCTGCTACAGCAGAATCTGATGAACACAAGAGACATAGAAGGCAAAGATTTTGGTATTGGTATTGGTGTTGGTATTGGCAATGGTATCTTTCCTAGTTCAACTTTGCCACTTCCTCATCAAAGCCAAAGCTTACTCTTCCCTTTCCCAACCTCAACCAGCTCTTTTGACACCAACCCTTGTTCAGTGTCAACCTCTCTGAGATCCTCCAATGTTTATAACTATGGGCAGGAGTTTAAAGCAATGGAGGAGCCAACCATCAACAGTACTACTACTATAGTGCCTTGCACAAGTGGCACCAACACACATCCATGGGAGATAGCAGCAACAAGTGGAATAGGCTTGGGAACTTCAAACTATTGGAATTGGGAGGATTTTGATTCATTGGTCTCGACTGATCTAAAAGATCCCTGGGATGATTCTGATATCAAACCATGA 951 0.4406 MGLSSKQVSSSGLDWKQTLLEAQNLELPKPNLMRKQQQQQNQPSESLKCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRVKKSITPTTSSINTTTPTTITSSTCTTTVTTSIANMDAMLASSRMTIQTPLADDQKNVASSLYQALIRPPPLLLQQNLMNTRDIEGKDFGIGIGVGIGNGIFPSSTLPLPHQSQSLLFPFPTSTSSFDTNPCSVSTSLRSSNVYNYGQEFKAMEEPTINSTTTIVPCTSGTNTHPWEIAATSGIGLGTSNYWNWEDFDSLVSTDLKDPWDDSDIKP 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03823 316 MobiDBLite consensus disorder prediction 30 48 - -
Pste3g03823 316 ProSiteProfiles Zinc finger Dof-type profile. 47 101 IPR003851 GO:0003677|GO:0006355
Pste3g03823 316 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 35 205 IPR045174 GO:0003700|GO:0006355
Pste3g03823 316 MobiDBLite consensus disorder prediction 26 48 - -
Pste3g03823 316 Pfam Dof domain, zinc finger 46 99 IPR003851 GO:0003677|GO:0006355
Pste3g03823 316 ProSitePatterns Zinc finger Dof-type signature. 49 85 IPR003851 GO:0003677|GO:0006355
Pste3g03823 316 MobiDBLite consensus disorder prediction 104 118 - -
Pste3g03823 316 MobiDBLite consensus disorder prediction 91 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03823 Pste-Chr3 30583853 30584803 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03823 39 192 C2C2-Dof Transcription Factor Family AT1G51700 40.994 1.79e-32 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pste3g03823 zf-Dof 1.5e-31 No_clan