Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03385 CCTCATTCCTGCATGCACATTTCTTTACATGGGCATGCTGTGCTGTGCTAACTCGGTTGTTGTTCTTCCCAAAGGATATTGGAGCTCCTTCAGTTCCTCTTCATCTATGCATCACTAGCATCAATAAGTTGTGCTCATTTGGTTTTTCAAACAACACTGTCAAGTTGGCTTCTCAGAGATGGCTGAGAAAGAGAGTATGTATTCTTTAGGTGATTGGAGGAGAATACCAATTTGCACTTTCTTTAAGGATGCCAGACTAGTTTTTAAAGCAGATAGTCTTGGTCGGGAAATTATGTCAATTGCATTGCCTGCAGCATTGGCTTTGACAGCTGATCCTATTGCTTCACTGGTTGACACAGCATTTATTGGCCAAATAGGTCCAGTAGAGCTTGCTGCTGTAGGAGTTTCAATAGCACTCTTCAATCAAGTATCAAGGATCGCAATATTCCCTCTTGTCAGTGTTACAACCTCTTTTGTGGCTGAGGAAGATACCCTTAGTGTAGCAAGTCCTCCAATAGAGAACAATAGACGCTTGGAAGCAGGTGCACCTATGGATGCCGAAACGAAAGAGTTATTACCACAGAAAGTTACAGGTGGAAATGATCACAATTCAGATTTAGTTGGTGAAAGCTTTAATATAGTCAAGGAGGAACATAAGAAAAGGCAGATCCCTTCAGCTTCATCTGCATTATTTATTGGTGGCATTCTCGGCCTCATCCAAGCAATATTTCTTGTATCTGCAGCAAAACCTTTGTTGAACTTCATGGGGGTAACTTCTGACTCCCCTATGCTACACCCTGCACAGCAGTATCTGACATTGAGGTCCCTTGGTGCTCCTGCTGTTCTTCTCTCATTAGCGATGCAGGGAGTCTTTCGGGGATTTAAAGACACTAAAACTCCTCTATATGCCACTGTGGCAGGAGATATAACCAACATAGCACTAGATCCTTTATTCATGTTTGTATTCCGCTTGGGTGTCAGTGGTGCAGCCATAGCCCATGTTATATCTCAGTACCTAATTTCTGCTATACTCCTGTGGAGGTTATTGGAACAAGTTGACCTTATACCTCCAAGCATAAAGCATCTGCAATTAGACCGATTTCTTAAAAATGGCTTTCTATTATTAATGAGAGTCATCGCTGTGACATTCTGTGTGACACTGGCTGCATCATTAGCTGCACGGCAAGGATCAACATCCATGGCTGCATTTCAAGTCTGTCTACAGGTTTGGTTGGCAGTGTCTCTTCTTGCTGATGGTCTGGCTGTTGCTGGGCAGGCTATTCTTGCGGGTGCTTTTGCTAATAAGGACTTTGACAGGGCCACAGCAACTGCATCCCGTGTTCTGCAGATGGGTTTGGTTCTAGGATTGGCACTGGCATTCATTCTTGGAACAGGATTGCACTTTGGTGCTAAACTATTTACAAAAGATGTTAATGTCCTCCAACTCATTCAAATTGGGATCCCGTTTGTTGCAGTCACTCAACCCTTGAATTCTTTAGCATTTGTATTTGATGGTGTCAACTTTGGGGCATCTGATTTTGCATATTCAGCCTTCTCCATGGTTTTGGTGGCAATTCTTAGCATAATTTGTCTGCTTATTTTGTCATCCGCTGGTGGTTTCCTTGGAATTTGGGTTGCTTTGACCATCTATATGGGTCTTAGGGCATTTGCTGGCTTCTTGAGGATCGGAACGGGATCAGGACCTTGGGGCTTCCTGAGAAGCTTGTGATTGTATATGACAGGCACCATTATTATGGCTTCATATTAGGCCTATGTTTTAGGGTTGTTTGCTTATTACATGAAAGTAAGGAAAGCATTCCCTAGGTTTTAAATCCCTTGGAAATTTTTCTGAAAAAATAGGCACTTCTGTCTGCTTGATTGTGTTTGCGGCATTGGTTGAAAATCTACCTCTGCATAATATGTACAGAAACTCTATTCTCATATACAGTGAAATGAAATGAAATATGCAACAAACATAGGCATTTTTCCGTCCAGAGAGGTTTTTTAAGAAAATTTGACGAAAATGATGAGTGTTTGAATAATCCCCGAAATGGTGTAGGTGACTGCCATATCATTTGCCAGATTAGGTTGTACTTGCTGAAACCAAAAAGTGGGTTGGCCAGTTGCTAAAAACCGGCAAGTCAATTGCCTTTTTAGATTGCATGCACACATTTCCATTGTATAATTATTAAGAGAAGCAAGACCTAAAAAATTATTAACGAATTTGTATTTTGACATAGTCGAAAATCGAAGTATATAAATCATCACATTACCAGAATCTAAAATACTGTTTTAAGAGACTTTGGATTGCGATATGATCGAAAATCGAAAAGTATATAAACAAAAAGATAAATTAACATAATCACTAATTAGCTTTATTCCCAATAAAGCAGAGTAAGATTTACAAAGTACCTATTGGATAAAAGTCAAACACACTGGTTAAAAGAAATACACCAAGGAAAACTGGTAGTGATCGCAGGTAATGATTGCATCTCTTAATATAAATACAAGGTAAGAGGTACGTGTCATTTACTCATTTAGGAAAATTTATTACATTTCAACCTTTTTTCACCTTATTTATCTTGGTCATTTACTTACTTGAGCGTCAAGTTCTGTCTTGCAGGTTCCTCCTTTGTCTATTCCAGAAGGTGCTACGATACTCAACAAAATTCATCAAAGTGATTTATACTCAGGTACTTTTTTGTAAGAACATCCACTGAAGCACAAACTAAATTATTCTTGCTGAAGCACAGACTACGAACGCTTGCAGTGGGGAGGGGAGGGAATATACATGTTATGGGAATTGGCAACCCAGCTGGCAGGTTCAATGGGCAGTTAACATGTGTCACGAAAACTGAAAACTAGTAACTTAGGC 2875 0.4 MAEKESMYSLGDWRRIPICTFFKDARLVFKADSLGREIMSIALPAALALTADPIASLVDTAFIGQIGPVELAAVGVSIALFNQVSRIAIFPLVSVTTSFVAEEDTLSVASPPIENNRRLEAGAPMDAETKELLPQKVTGGNDHNSDLVGESFNIVKEEHKKRQIPSASSALFIGGILGLIQAIFLVSAAKPLLNFMGVTSDSPMLHPAQQYLTLRSLGAPAVLLSLAMQGVFRGFKDTKTPLYATVAGDITNIALDPLFMFVFRLGVSGAAIAHVISQYLISAILLWRLLEQVDLIPPSIKHLQLDRFLKNGFLLLMRVIAVTFCVTLAASLAARQGSTSMAAFQVCLQVWLAVSLLADGLAVAGQAILAGAFANKDFDRATATASRVLQMGLVLGLALAFILGTGLHFGAKLFTKDVNVLQLIQIGIPFVAVTQPLNSLAFVFDGVNFGASDFAYSAFSMVLVAILSIICLLILSSAGGFLGIWVALTIYMGLRAFAGFLRIGTGSGPWGFLRSL 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03385 516 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 10 514 IPR044644 -
Pste3g03385 516 NCBIfam MATE family efflux transporter 44 485 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pste3g03385 516 Pfam MatE 166 258 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pste3g03385 516 Pfam MatE 317 470 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Pste3g03385 516 CDD MATE_DinF_like 34 505 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03385 Pste-Chr3 26636465 26642237 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03385 3 26636465 26642237 Pste1g04279 1 27450117 27456780 ECH
Pste3g03385 3 26636465 26642237 Pste3g03385 3 26636465 26642237 ECH
Pste3g03385 3 26636465 26642237 Pste1g02219 1 7396056 7396816 PCT