Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03357 GATTGCTGCACGTTGATAATTTCTCCTTTTTCTACAAAAACTGTAAAAGCCACAGGATTGAAGCTTCCTACCACTCAAGCAGGCATTGCTTTGATGGAGAGAAGTGATGAAGAATCGTGGTTGGAGGAGAATGATTCATCGGCAGTCCTTAGCTACATAAAGCAAATGCTGATGGAAGAGGAAGAGGAGAAGTACAGCATGTTTGATGATTCCATAGCCATCCAACTCCAAGATACGGAGAGATCATTTTATGAGGTTATGAGTTGTAAAAGCTATCCTCCCAGCGTAGAGAGCCCTGAGCAAAGTCTCTCTGGCAGCTCCGGTGATTTTAGTATTACAAGCAGTTGCGGTAGTAACAGTACTATGAGCAGTGCCGAGTCTCCCTTTCCCCTTGACCCCGATCCCTCCACGCTTCCTATTCCTTCTAACCTTGGATTTGGATTCTTGGACAATCCCCTCGCTGAAATTTTTGAGACTGCTATCCCTCAGCCATCCCTTTTGTCTTCTTTCACAAAGGCTCCTTGCCCGGTGGTAATTAAGACAGAAACTAGTGTTGAAGGAGATGCAGATGGGAGAAGCAGCACATCATACATGGATGAGACTGAACTATCCGATTTGTTTGATAAAGTTCTCCTAGGCACTGGGTTAGGGAAAGGGACACCTCCTAAGACAACCCTTCACCAAACACACATGTTGTCCTGTGGAGATGTTTTGGAAAGTGAGGAGGAGGTTGTGGATCTGAGGACACTGTTGATGCTATGTGCACAAGCTGTTGCTTCTGATACTCCTTCTTTTGCTACGCAGTTAGTCAATCAGATTAAGCAGCATTCTTCTCCAATGGGGAATGAAACTCAGAGGCTTGCACATTACTTTGGAAACGCGCTTGAAGCTCGCTTGGATGGAACTGGTTACCAGGTTTATTGTGCTCTATCCTCCAAAAGAATCTCTGCAAAAGATATGATAAAAGCTTACCATGTATATGCTTCAATATGCCCATTTGAAAAGCTAGCAATAGTTTTTACCAACAATTCAATTAAACCTCTAACCCGAGTTGCTCAAACAGTTCACATCATAGACTTCGGTGTCCGCTATGGCTTCAAGTGGCCTAAACTTATCAGTAGTCTATCAACACGTCCTGGTGGGCCACCCAAGCTACGAATCACTGGGATAGATCTGCCACAACAATCTGGTTTCAGGCCAGAAGAGAGGGTGCTGGAGACTGGGCGCAGACTTGAAAATTATTGCAAGCGTTTCAATGTTCCATTCGAGTTCAATGCCATTGTACAGAGATGGGACACCATCAGAGTTGAAGACCTCAAGATAGAGAAAAACGAATTTGTGGCCGTGAACTGCATGTTTCAGTTTGAGCATCTGCTGGACGAGACAGTAGTGTTGGATAATCCCAGGGATGCTGTTTTGAGGTTGATCAGGAAAGCAAATCCTGACATATTCATACATAGCATTGTGAACGGATCCTATGATGTACCATTCTTTGTGTCACGGTTCCGGGAGGCTGTCTTTCATTACTCTGCATTGTTCGATATGCTTGAGAGCAATGTTAGTCGTGAAGATCCCATGAGGTTGATGTTTGAGAAGGATTTGTTTGGAAAGGAGATAATGAACATCATAGCTTGCGAAGGGTGCCAGAGGGTGGAGAGACCCCAGACGTACAAGCAATGGCAGCTTCGGAACATGAGATGTGGGTTTAAACAGCTTCCTGTGGATCACAAAATTGACAGGTTAAGGGGTTGGTTGAGGGATGATGCGTACAACACTAATTTCATGCTTGAGGTGGATGGCCACTGGGTGCTACAAGGTTGGAAGGGTCGAATTCTACGTGCTTCCTCTTGTTGGGTACCCGCATAGCATAGTAAGCCTTGAACATTGTTGATTCTTCCAAAATCTACTCTTACCCACAAACACAACAATACTCCTACTCTCCTTCAATCTCACTACCCCATTTGTTGCTTCATCTCAACATTATGTGTTACTTTCTTTCAATGTGTCATCACATGTTTACTACTTACATATCTCACAATTCAACCAATATAATTCACCACCGTAAACAATATTCTTATCGTCGGTATATTGTCA 2094 0.4389 DCCTLIISPFSTKTVKATGLKLPTTQAGIALMERSDEESWLEENDSSAVLSYIKQMLMEEEEEKYSMFDDSIAIQLQDTERSFYEVMSCKSYPPSVESPEQSLSGSSGDFSITSSCGSNSTMSSAESPFPLDPDPSTLPIPSNLGFGFLDNPLAEIFETAIPQPSLLSSFTKAPCPVVIKTETSVEGDADGRSSTSYMDETELSDLFDKVLLGTGLGKGTPPKTTLHQTHMLSCGDVLESEEEVVDLRTLLMLCAQAVASDTPSFATQLVNQIKQHSSPMGNETQRLAHYFGNALEARLDGTGYQVYCALSSKRISAKDMIKAYHVYASICPFEKLAIVFTNNSIKPLTRVAQTVHIIDFGVRYGFKWPKLISSLSTRPGGPPKLRITGIDLPQQSGFRPEERVLETGRRLENYCKRFNVPFEFNAIVQRWDTIRVEDLKIEKNEFVAVNCMFQFEHLLDETVVLDNPRDAVLRLIRKANPDIFIHSIVNGSYDVPFFVSRFREAVFHYSALFDMLESNVSREDPMRLMFEKDLFGKEIMNIIACEGCQRVERPQTYKQWQLRNMRCGFKQLPVDHKIDRLRGWLRDDAYNTNFMLEVDGHWVLQGWKGRILRASSCWVPA 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03357 621 MobiDBLite consensus disorder prediction 95 127 - -
Pste3g03357 621 Coils Coil 619 621 - -
Pste3g03357 621 ProSiteProfiles GRAS family profile. 238 619 IPR005202 -
Pste3g03357 621 MobiDBLite consensus disorder prediction 95 136 - -
Pste3g03357 621 Pfam GRAS domain family 247 618 IPR005202 -
Pste3g03357 621 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 176 608 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03357 Pste-Chr3 26383252 26385475 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03357 49 621 GRAS Transcription Factor Family AT1G07530 44.653 0.0 539
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pste3g03357 GRAS 6.5e-105 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03357 3 26383252 26385475 Pste3g03357 3 26383252 26385475 ECH
Pste3g03357 3 26383252 26385475 Pste1g02287 1 7816736 7839430 PCT