Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g03333 ATGCTTTCTTCCTCTATTTCACTCTATTTAGATCCTCCTAATTGGCAGCAGCAACAACAAAACCAACATGGCAGTAACAATCCTCAGCTGCTTCCAGTTGCACCGCCACAGGCCGCTCAGGTGGGAGTTGAACCAGGCCCAGTTCGGCCCGGTTTAATGGTGGATCGGGCCCAGGAAGGAGCTTTGGAGTGTCCTCGCTGTGAATCCACCAACACAAAGTTTTGCTACTTTAACAATTACAGCCTCTCACAGCCACGCCACTTCTGCAAGACATGTAGGCGTTATTGGACAAGAGGTGGCGCTCTCAGAAACGTTCCTGTTGGTGGTGGATGTCGTAGGAACAAGAAGAACAAAAAGAGTTGCTCAAAATCTCCTGTATCTATTGAGAAAACATCACTTCCTTATTCCACAAGTTCAATCCCTGACCTTGTTGCTCGATTCCCACAACCCTTCTTGCCCTCTATGAACCGCTATGGCGTTGGTGTAGGGAACACAGCCGTTAACTTTCAACCACTAAATGCTGTTAACATGGGGTTTCAAATTGGAGATCACGGTTCCAGTGTTGAGGGAGTTGAGCAGTGGCGATTTCAGCAGTTTCCTTTCTCGAATGGTTTTGAGTCAACTTCGGTTGTTTCTTCCTACCCTTTCCAAAGTGAAAGTGTTGATGGTTTGGTTGGAGATATTGCCCCAACTTCTAAGGTTTCTCAGTTTCCTGCACGCATTAAATTGGAATATAACGGTGCTTTGAATCTCTCAAAATCTCCTTTAATTGTCTCAGAAAATAGTAACCATTACTATTCATGGACGGATTTATCTGCTCTTGCATCTTCTTCCGCTAATCATCTCTTGTAA 852 0.4507 MLSSSISLYLDPPNWQQQQQNQHGSNNPQLLPVAPPQAAQVGVEPGPVRPGLMVDRAQEGALECPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKNKKSCSKSPVSIEKTSLPYSTSSIPDLVARFPQPFLPSMNRYGVGVGNTAVNFQPLNAVNMGFQIGDHGSSVEGVEQWRFQQFPFSNGFESTSVVSSYPFQSESVDGLVGDIAPTSKVSQFPARIKLEYNGALNLSKSPLIVSENSNHYYSWTDLSALASSSANHLL 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g03333 283 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 30 152 IPR045174 GO:0003700|GO:0006355
Pste3g03333 283 ProSitePatterns Zinc finger Dof-type signature. 64 100 IPR003851 GO:0003677|GO:0006355
Pste3g03333 283 Pfam Dof domain, zinc finger 61 116 IPR003851 GO:0003677|GO:0006355
Pste3g03333 283 ProSiteProfiles Zinc finger Dof-type profile. 62 116 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g03333 Pste-Chr3 26115742 26116704 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g03333 1 118 C2C2-Dof Transcription Factor Family AT2G37590 54.483 4.86e-41 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pste3g03333 zf-Dof 2e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g03333 3 26115742 26116704 Pste1g02337 1 8076450 8078097 PCT