Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02983 GCACCGTACGTCACAAAATTTCCTCCTCAAACCCAACCAAAACCTTATTCATTAAGAATAACCTCTCTCTCTATCTCTCTAGCATGGGTGAAGTAGAAAGTGGCAAAGGGATTAAGCTGTTTGGAACAACAATTAGGGTGCATGGGAAAGAAAGAAAGGAAGAAAAGAAGGAGAGTGAAGAGAAGAGAGGTGATAAGATGATAGCATGTCCAAGATGTAAGAGCATGGAGACCAAATTTTGCTACTTCAATAACTACAACGTTAATCAGCCAAGACATTTTTGCAAAGGATGCCAAAGATACTGGACGGCCGGTGGAGCCCTTCGGAACGTGCCCGTTGGAGCCGGCCGACGAAAGGCTAAATCCCCGACACAACAATTTGCTTTCGATGACTGCCATTTCAACTATAGGGGACGTGAACGGTTCAGATTATTTGCCACCTACGCACTTCATCTA 455 0.444 MGEVESGKGIKLFGTTIRVHGKERKEEKKESEEKRGDKMIACPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKAKSPTQQFAFDDCHFNYRGRERFRLFATYALHL 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02983 124 ProSiteProfiles Zinc finger Dof-type profile. 40 94 IPR003851 GO:0003677|GO:0006355
Pste3g02983 124 PANTHER CYCLIC DOF FACTOR 2 25 97 IPR045174 GO:0003700|GO:0006355
Pste3g02983 124 Pfam Dof domain, zinc finger 38 94 IPR003851 GO:0003677|GO:0006355
Pste3g02983 124 ProSitePatterns Zinc finger Dof-type signature. 42 78 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02983 Pste-Chr3 22582050 22583485 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02983 4 95 C2C2-Dof Transcription Factor Family AT2G34140 61.261 2.62e-43 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Pste3g02983 zf-Dof 1.3e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02983 3 22582050 22583485 Pste3g02983 3 22582050 22583485 ECH