Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02452 CAAACATTCACACAAACACATTCACGTGCCACCTATTCTTCCTTTCCTGTCTTTAAGATCACCAACATATTATAGCACACTTCACCATGGTTTTTCCTAAACACCCTTCTGAGTCTGACCTTTTTCTCCATTCCAACTTTGCTTCTCGTTATGCACGCCACTCTCTTCCCAGGTTCAGCATGCCCGAGAACTCCATGCCCAAGGAGGCTGCCTACCAGAACATTCACGATGAGTTGCAGCTCGATGCCATTCCAAAGCTCAACTTGGCGTCCTTTGTTACCACTTCCATGGAGGAAGAGTGCAACAAACTCATCATGGAATCCATCAACAAAAACTATGTTGACATGGACGAGTATCCCATCACCACTGACCTTCACAATCGATGTGTGAACATGATAGCTCGTATGTTCCATGCTGAAATTGGAGAGAATGAGAATGCAATTGGAGCAGGAACTGTGGGATCATCAGAGGCCATAATGCTGGCAGGGCTTGCATTCAAGAAGAAGTGGCAGAACAAGCGAAAGGCAGAGGAAAGCCCTATGATAAGCCCAATTTGGTGA 560 0.4589 MVFPKHPSESDLFLHSNFASRYARHSLPRFSMPENSMPKEAAYQNIHDELQLDAIPKLNLASFVTTSMEEECNKLIMESINKNYVDMDEYPITTDLHNRCVNMIARMFHAEIGENENAIGAGTVGSSEAIMLAGLAFKKKWQNKRKAEESPMISPIW 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02452 157 Gene3D - 66 155 IPR015421 GO:0003824
Pste3g02452 157 Gene3D - 1 65 - -
Pste3g02452 157 FunFam Glutamate decarboxylase 4 65 - -
Pste3g02452 157 SUPERFAMILY PLP-dependent transferases 15 148 IPR015424 -
Pste3g02452 157 Pfam Pyridoxal-dependent decarboxylase conserved domain 33 152 IPR002129 GO:0016830|GO:0019752|GO:0030170
Pste3g02452 157 PANTHER GLUTAMATE DECARBOXYLASE 1 154 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02452 Pste-Chr3 17328805 17329663 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02452 1 155 Calmodulin-binding Proteins AT2G02010 72.903 4.00e-78 239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02452 3 17328805 17329663 Pste3g02452 3 17328805 17329663 ECH