Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02451 ATGGTTGATGACAACACTATTTGTGTGGCTGCAATCTTGGGTTCAACCTACAATGGAGAGTTCGAAGATGTCAAGCTCTTAAACGACTTGCTACTAGAGAAAAACAAGCAAACTGGATTGGATACACCCATTCATGTTGATGCTGCTAGTGGTGGCTTTATTGCTCCCTTCCTTTATCCAGAGCTAGAATGGGATTTCAGACTGCCATTGGTGAAGAGCATAAATGTTAGTGGCCATAAGTATGGGCTTGTATATGCTGGTATTGGTTGGGTTATATGGAGAACCAAAGAGGACTTGCCGGAAGACCTTGTTTTCCATATCAATTACCTTGGAGCTGACCAACCCACTTTCACCCTCAATTTCTCTAAAGGTTCTAGTCAGATCATTGCCCAATACTATCAGCTTATTCGCCTTGGTCAAGAGGGGTACCGAAGCATAATGGAGAACTGTAGAGAAAATGCAATGGTGGTGAAGAAAAATTTGGAGAAAAGTGGACGCTTTAACATACTCTCAAAAGACGATGGTGTTCCTGTGGTGGCGTTTTGTCTGAAAGATAGAAGTGAGTATGATGAGTTCAAGATATCAGAAATGTTGAGGCGGCACGGATGGATAGTGCCAGCGTATCCAATGCCACCAGCAGCACAACACATAAACGTGCTGCGTGTAGTGATTAGAGCAGAGTTTTCACGCACCCTTGCAGAACGGCTAGTGTTTGACATACACAGTGTGTTGGATGAACTTGAAAAGATACATCCACCCAAAGTGATGAACAACATTAAGGAAGAGAACAAGGCAATGGTTGAAACCAGGGTGAAGAACACTGCATTGGATGCACACAGGGAAATCATTGCTCAAGAATCCAACAAGCGTCACAAAGTCATGGCTGCCTAGTTAGGGAGTTCTACCTCGCTCCTCCGCAAATTAAATAAGGAGACTTCACTATTTTATTTGTTCTAACTTCATAAAATATTCTCCCTTAACTATATATATTTACTTGATTCTTTTCCAAAATTTCTGGAGTTAATCATTTAGCTTACTCCATTGTTAGTTTATTTTCCTATATATATATATTTTGTAACATTTTCCCTATAATTTGAT 1098 0.4053 MVDDNTICVAAILGSTYNGEFEDVKLLNDLLLEKNKQTGLDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRTKEDLPEDLVFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGQEGYRSIMENCRENAMVVKKNLEKSGRFNILSKDDGVPVVAFCLKDRSEYDEFKISEMLRRHGWIVPAYPMPPAAQHINVLRVVIRAEFSRTLAERLVFDIHSVLDELEKIHPPKVMNNIKEENKAMVETRVKNTALDAHREIIAQESNKRHKVMAA 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02451 296 PANTHER GLUTAMATE DECARBOXYLASE 1 289 IPR010107 GO:0004351|GO:0006536|GO:0030170
Pste3g02451 296 SUPERFAMILY PLP-dependent transferases 1 249 IPR015424 -
Pste3g02451 296 FunFam Glutamate decarboxylase 164 251 - -
Pste3g02451 296 Gene3D - 1 163 IPR015421 GO:0003824
Pste3g02451 296 Pfam Pyridoxal-dependent decarboxylase conserved domain 6 184 IPR002129 GO:0016830|GO:0019752|GO:0030170
Pste3g02451 296 Gene3D - 164 250 - -
Pste3g02451 296 NCBIfam glutamate decarboxylase 1 247 IPR010107 GO:0004351|GO:0006536|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02451 Pste-Chr3 17327102 17328690 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02451 1 284 Calmodulin-binding Proteins AT5G17330 74.828 1.56e-159 452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02451 3 17327102 17328690 Pste3g02451 3 17327102 17328690 ECH