Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02372 ATGAGATTCTTAGCGGTGTGTTTTGTCTTATTATTGGTGGTGGTGCTAGAAGCAGAAGAAACCTCATGTTCTACTACTTTCAACAGAGAGAAAAGGCTGTCAGAATTCAAGGCCAAACTTGATCAAAAGATTCAAGAGTTAGCAACTCCTTTGGCATCACCAACTGCTTCCTCAGAAACCAAGATGAGTGGGAGGGTGTTTCAGCTGAGTGAATATGGTGCAGACCCAACAGGGTCTGAAGAGAGTAGTGATGCCATATTGAAAGCAGTGGAAGATGCATTTGCATTGCAGAAGGGTCTTGAGTTGGTGGAAGGGGTAAGTGACCTTGGAGGGGTTGTGATTGATTTGGAAGGTGGGAACTACAAAATCAGCAAACCCATTACATTCCCTTCTGCTGCTGGCAATCTTGTGGTAAAAGGAGGAACATTGAGAGCATCCGATACATTTCCTGGTGATCGACATCTAGTTGAGCTGTGGTCATCAAGATCCGGGAAACTTGAGACAGAAGAATCTCCGAATGTTGATGTCTTGGACAGCGTCAAAGCCCAAAACAGTGCAATTTACTATGAAGACATAACTTTTCGGGACATTCTCTTTGATTCATCCTACAGAGGAGGCGGAATATTCATTGTTGACTCTGCAAGAACCCGGATCAACAATTGTTTCTTTCTTCATTTCACCACACAAGGAATATTGGTCCAGCAAGGACATGAGACTTTCATATCAAGCTGTTTTCTTGGGCAACACTCAACCGTCGGCGGCGACAGAGATGAGAAGCACTTCTCAGGAGTGGCCATTGATCTTTCTAGCAATGATAATGCAGTCACAGATGTTGCTATTTTCTCAGCAGCCATTGGTGTTGTGCTGAGGGGTCAGGCTAACATTCTAACTGGGGTGCATTGTTATAACAAGGCTACATCTTTTGGTGGCATAGGCATATTAGTGAAATTGGCAGGTAATTCACTAACTAGAATTGATAACTGTTATCTGGATTACACTGGAATAGTCATGGAAGATCCTGTGCAAGTTCATGTCACTAATGGGTTGTTTCTAGGGGATGCTAACATTGTATTGAAGTCTATTAAAGGTCAAATTTTGGGCTTAAATATAGTGGATAATATGTTTAATGGTGACCCCAATAAGAAGGTTCCTATTGTAAATCTAGATGGGGAATTTAGTAGCATTGATCAAGTGCTGATTGATCGCAACAATGTGAATGGCATGAGCTTGAGATCAACGGTTGGGAAGTTAACTGTGAGTGGAAATGGCACAAAGTGGGTGGCTGATTTTTCATCAGTTTTGGTGTTTCCTAATAGGATTAGTCATTTTCAATATTCATTTTATGCTCAAGATGAGCCTAAATTTGTACCACTTTCTGTGACCAATCTGTCAGATAATGTCGTTGTTGTGGAGACTGAGAAAGAAGCTAGAGGTTTCGTCTCCTTCACAGTTGAACAATAA 1461 0.4168 MRFLAVCFVLLLVVVLEAEETSCSTTFNREKRLSEFKAKLDQKIQELATPLASPTASSETKMSGRVFQLSEYGADPTGSEESSDAILKAVEDAFALQKGLELVEGVSDLGGVVIDLEGGNYKISKPITFPSAAGNLVVKGGTLRASDTFPGDRHLVELWSSRSGKLETEESPNVDVLDSVKAQNSAIYYEDITFRDILFDSSYRGGGIFIVDSARTRINNCFFLHFTTQGILVQQGHETFISSCFLGQHSTVGGDRDEKHFSGVAIDLSSNDNAVTDVAIFSAAIGVVLRGQANILTGVHCYNKATSFGGIGILVKLAGNSLTRIDNCYLDYTGIVMEDPVQVHVTNGLFLGDANIVLKSIKGQILGLNIVDNMFNGDPNKKVPIVNLDGEFSSIDQVLIDRNNVNGMSLRSTVGKLTVSGNGTKWVADFSSVLVFPNRISHFQYSFYAQDEPKFVPLSVTNLSDNVVVVETEKEARGFVSFTVEQ 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02372 486 PANTHER POLYGALACTURONASE QRT3 10 486 IPR039279 GO:0004650
Pste3g02372 486 FunFam Polygalacturonase QRT3 69 481 - -
Pste3g02372 486 SUPERFAMILY Pectin lyase-like 65 412 IPR011050 -
Pste3g02372 486 Gene3D - 70 475 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02372 Pste-Chr3 16822213 16825709 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02372 3 16822213 16825709 Pste3g02372 3 16822213 16825709 ECH