Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02325 ATGATGAAGGAAAACAAATCATCAGCACCTAAAATGCTTAACAGGAATTGGGTTTTAAAGCGTAAACGGAGAAAGCTTCCCTTAGGACTAGATCAGTCCTCTGGTAAAGAGCAATCGAATGGTAAAGAAGAAAATTCACTAACATCTGAATCTTCTAGGAATGCTTCAGCTAAACGTGCACTTAAGACTGAAGTAGCTACTGATCAAATTTCATCTAAGAAGAAAGGAAATGATGGGTATTACTATGAATGCGTGATCTGTGATGTTGGTGGCAACTTATTGTGTTGTGATAGCTGTCCTCGCACTTATCATTTGCAATGTCTTGATCCCCCTCTTAAGCGCATTCCTAATGGGAAGTGGCAATGTCCAAGTTGCTTTGAAGGAAGTGATCAACTAAAGCCCATAAACCATCTGGATCCAATTTCAAAACGAGCAAGGACAAAGATTGTCACTGCAAAATCAAAAGATCAAGTTAACTCACTTAACCTTGAAAATGTTTTTGGAAGTAAACTTATTTCAAGGAAAAGATCCTCAAGCAAAGGTAAATCTATTTCAACTATGGGAGTCAAATTCTTTGGAAAGAGATTATTGTCTTCCCCGGCAGATGAAACCTGTAGCAATAAACCTATTGATCCATCTCTTGGGAGTCCTCTGGAAGGAACTTCATCATGTGTGGATACTGATGAAAAGAAATTGAGCTTGTCCCCAACAGACTCCCCTATGGACAGGAAGTCAACTTCACCTACCAAGGAAGTTTTATCTCTCTCTAAAATTACTAATTTAAAAGCAAATGATGAACAACTGGAGGAGAAGACAGATTTATCGTGCAATAAGATTCCTTTAAGGAAAACACTTGTTCTTGCTATTGCTGCTAGTGGAGAGGAAGTCAGAAAACGGAAGAGTAAAATTATTAATGATAACAGTAATCAAAAGAAGCAAAAGACTGAGAAGGGGAAAAAAATTGTAAATCCTTCTTCTGTAAAGTCTAAGTCTGGGAATAATAAAGTACACAAGAAGCAGAAGTCTATAGCCCATAGCATGTCTGCATCTGTATCAAAAGAAGATGTTGGAAATAAGAATTCATATGCCCAGCAGAAAGATGAGAAGTTGTCTCAGGTAATGAAAGACGCATCAAGAGAGCTTGATAAAGCACGAAGTCTTGGGGACGAAACTTTGATGCATGGGGATGGTGCCATTCTTGAGTCTCTGCAGGTTGATCGGGTTCTAGGGTGTCGAATTCAAGGTGAAAATGCTAATTCATTACGTCACTTGTCCTTGAATGTTGTGGGTGACTCACCTTCTGGTGATCTGGTAATATCAGAAAATCAGACCAGACTACTAGAGGATAATTCTGCTTGTGCTAATGATTTGGATGTTGAATCAACTGAAAATCGTAATGATGATCGTCAGAATGTCGTCAAGAATTCTGATGAAGAAACATTGAAAAACACTAATACAGTGGAAAGGATTCATGTATACAGAAGAGCAATAACAAAAGAAAGTAAGAAAGGAAATCCTGTAGATTCATTGAGTAAAGCCACTGATGATTTAGGTCACTGTGCCAGAGATGGTAAAGATCTGGATGATTCTGCTGTATCTGCTGGACAGTTGGAAAAACCAAATGACAAGTTGGAGACAGAGGAGAGCATTAATGTTGCTTTCAGAAATGAGGATAACAGTGAGCTTCCAAAAAATTGTGAAATAAATGTCTCTCTTGAAACGAAACAACAAGAAATGAATGCAGAGAAGGTAATGAGTGGCAGTCATAATGATAAAGCTCAGGATGCTAATGCAGTTGAATGTGCAGGTCCAAATGGAGAGGAAGTTTTCTATGAATTTTTAGTTAAATGGGTAGGAAAGTCTCATATTCATAATAGTTGGATTTCTGAATCCCAGTTAAAAGTTCTTGCAAAGAGAAAACTAGAAAATTACAAGGCCAAGTATGGGATGACAATAATTAATATTTGTGAGGATTGTTGGAAGCAGCCCCAGCGGGTGCTTGCCCTTGGAACTTCCAAAAATGGAACATCTGAAGCATTTGTAAAATGGACTGGACTGCCTTATGATGATTGCACTTGGGAAAGTTTAGATGAACCAGTGCTTCAAAATTCTTCTCATTTGATTAAACTCTTTAATGAGCTTGAAACCCTCACACTGGAAAGGGATTCATCAAAGCAAAATTCTATGAGGAAAAGCAATGACCATCAGAATGATATTTTTAATCTTACAGAGCAACCTAAGTATCTAAAAGGTGGTTCTTTGTTTCCCCATCAACTTGAGGCTCTGAACTGGTTGCGTAAATGCTGGTTTAAGTCCAAAAATGTGATACTTGCTGATGAGATGGGGCTTGGGAAAACAGTTTCTGCTTGTGCTTTTATTTCATCATTGTATTTTGAATTCAAAGTTTCACTTCCTTGCTTGGTCTTGGTACCGCTTTCTACAATGCCTAATTGGCTTGCTGAATTTGCACTATGGGCTCCAGATGTGAATGTTGTAGAATATCATGGGTGTGCCAAAGCAAGAGCCATAATTCGTCAGTATGAATGGCATGCAACTGATCCAAATGGATTGAATAAGAAAACAGAAGCATATAAATTTAATGTGCTTTTAACTACATATGAAATGGTTCTTGCTGATTCTTCTCATCTGCGTGGAGTTCCTTGGGAGGTTCTTGTTGTTGATGAGGGGCATCGATTGAAGAATTCAGAAAGTAAGCTTTTCAGTTTGCTAAATACATTCTCCTTTCAACATCGTGTACTGTTGACTGGTACCCCTCTCCAGAACAACCTTGGCGAGATGTACAACTTGCTTAATTTCTTGCAGCCAGCTTCATTTCCTTCTCTATCTTCATTTGAGGAGAAATTTAATGATCTTACGACTGCAGAGAAAGTTGATGAATTGAAAAAACTTGTTGCTCCTCATATGCTTCGTAGACTTAAAAAGGATGCCATGCAAAATATCCCCCCTAAGACAGAAAGAATGGTCCCTGTTGAGTTGTCATCCATCCAAGCTGAATATTATCGGGCAATGCTTACAAAGAATTATCAAATATTGCGGAATATAGGGAAAGGGGTTGCCCAACAATCTATGCTGAACATTGTGATGCAATTGAGGAAGGTCTGTAATCATCCATATCTCATACCAGGAACTGAGCCTGAATCTGGTTCTGTTGAGTTTCTTCATGAGATGAGAATAAAGGCTTCAGCTAAGTTGACCCTTCTGCATTCTATGCTAAAGATTTTACATAGGGAAGGTCACAGAGTTCTTATTTTCTCCCAAATGACCAAGCTTCTCGACATCCTGGAGGACTATTTAACTATAGAATTTGGGCCTAAAACATATGAGAGAGTGGATGGATCTGTTTCTGTAGCTGATCGCCAGGCAGCAATTGCACGCTTTAACCAAAACAAAAGTCGATTTGTTTTCTTGTTGTCCACTCGCTCTTGTGGTCTTGGGATAAATTTGGCAACTGCTGACACTGTCATCATCTATGATTCTGATTTCAACCCACATGCAGATATCCAAGCAATGAATAGAGCACACAGAATTGGACAATCAAATAGACTTCTGGTATACCGGCTTGTGGTTCGTGCTAGTGTTGAAGAGCGTATCTTGCAGCTTGCTAAGAAGAAATTGATGCTTGATCAGCTTTTTGTAAATAAGTCTGGATCTCAAAAAGAAGTAGAAGATATTTTAAAGTGGGGAACTGAGGAACTCTTCAACGATTCTCCTGGACTGAATGGGAAAGACATGAGTGAAAATAACAATAGTAGCAAAGATGAAGTAGTAGCTGATATAGAACATAAACATCGGAAGAGGACTGGCGGTCTGGGAGATGTATACAAAGATAAGTGTACTGATAGCAGTAGCAAGATTCTGTGGGATGAAAATGCTATTTTAAAATTGCTTGATCGTTCAAACCTTCAAGATGGTTCCACTGATAATGCAGAGGGCGACTCTGAGAATGATATGCTGGGATCAGTGAAGGCCCTTGAGTGGAATGACGAAACAACTGAAGAACATGTAGTGGGTGAATCTCCTCCTCATGCAACTGATGATGTGTGTACACAAAATTCTGAGAAGAAAGATGATAATCCAGTGAATGGCAATGAAGAAAATGAATGGGACAAACTACTGCGAGTGAGGTAA 4149 0.3883 MMKENKSSAPKMLNRNWVLKRKRRKLPLGLDQSSGKEQSNGKEENSLTSESSRNASAKRALKTEVATDQISSKKKGNDGYYYECVICDVGGNLLCCDSCPRTYHLQCLDPPLKRIPNGKWQCPSCFEGSDQLKPINHLDPISKRARTKIVTAKSKDQVNSLNLENVFGSKLISRKRSSSKGKSISTMGVKFFGKRLLSSPADETCSNKPIDPSLGSPLEGTSSCVDTDEKKLSLSPTDSPMDRKSTSPTKEVLSLSKITNLKANDEQLEEKTDLSCNKIPLRKTLVLAIAASGEEVRKRKSKIINDNSNQKKQKTEKGKKIVNPSSVKSKSGNNKVHKKQKSIAHSMSASVSKEDVGNKNSYAQQKDEKLSQVMKDASRELDKARSLGDETLMHGDGAILESLQVDRVLGCRIQGENANSLRHLSLNVVGDSPSGDLVISENQTRLLEDNSACANDLDVESTENRNDDRQNVVKNSDEETLKNTNTVERIHVYRRAITKESKKGNPVDSLSKATDDLGHCARDGKDLDDSAVSAGQLEKPNDKLETEESINVAFRNEDNSELPKNCEINVSLETKQQEMNAEKVMSGSHNDKAQDANAVECAGPNGEEVFYEFLVKWVGKSHIHNSWISESQLKVLAKRKLENYKAKYGMTIINICEDCWKQPQRVLALGTSKNGTSEAFVKWTGLPYDDCTWESLDEPVLQNSSHLIKLFNELETLTLERDSSKQNSMRKSNDHQNDIFNLTEQPKYLKGGSLFPHQLEALNWLRKCWFKSKNVILADEMGLGKTVSACAFISSLYFEFKVSLPCLVLVPLSTMPNWLAEFALWAPDVNVVEYHGCAKARAIIRQYEWHATDPNGLNKKTEAYKFNVLLTTYEMVLADSSHLRGVPWEVLVVDEGHRLKNSESKLFSLLNTFSFQHRVLLTGTPLQNNLGEMYNLLNFLQPASFPSLSSFEEKFNDLTTAEKVDELKKLVAPHMLRRLKKDAMQNIPPKTERMVPVELSSIQAEYYRAMLTKNYQILRNIGKGVAQQSMLNIVMQLRKVCNHPYLIPGTEPESGSVEFLHEMRIKASAKLTLLHSMLKILHREGHRVLIFSQMTKLLDILEDYLTIEFGPKTYERVDGSVSVADRQAAIARFNQNKSRFVFLLSTRSCGLGINLATADTVIIYDSDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFVNKSGSQKEVEDILKWGTEELFNDSPGLNGKDMSENNNSSKDEVVADIEHKHRKRTGGLGDVYKDKCTDSSSKILWDENAILKLLDRSNLQDGSTDNAEGDSENDMLGSVKALEWNDETTEEHVVGESPPHATDDVCTQNSEKKDDNPVNGNEENEWDKLLRVR 1382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02325 1382 MobiDBLite consensus disorder prediction 1 69 - -
Pste3g02325 1382 ProSiteProfiles Chromo and chromo shadow domain profile. 661 723 IPR000953 -
Pste3g02325 1382 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1073 1232 IPR001650 -
Pste3g02325 1382 Pfam Chromo (CHRromatin Organisation MOdifier) domain 582 646 IPR023780 -
Pste3g02325 1382 Pfam Chromo (CHRromatin Organisation MOdifier) domain 662 713 IPR023780 -
Pste3g02325 1382 Gene3D - 666 713 - -
Pste3g02325 1382 Gene3D - 988 1215 IPR027417 -
Pste3g02325 1382 MobiDBLite consensus disorder prediction 515 529 - -
Pste3g02325 1382 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 136 IPR013083 -
Pste3g02325 1382 Pfam Helicase conserved C-terminal domain 1073 1184 IPR001650 -
Pste3g02325 1382 SMART PHD_3 83 126 IPR001965 -
Pste3g02325 1382 Pfam SNF2-related domain 772 1047 IPR000330 GO:0005524|GO:0140658
Pste3g02325 1382 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 724 978 IPR027417 -
Pste3g02325 1382 Gene3D - 569 665 - -
Pste3g02325 1382 MobiDBLite consensus disorder prediction 498 529 - -
Pste3g02325 1382 ProSiteProfiles Chromo and chromo shadow domain profile. 579 647 IPR000953 -
Pste3g02325 1382 MobiDBLite consensus disorder prediction 1355 1382 - -
Pste3g02325 1382 ProSiteProfiles Zinc finger PHD-type profile. 81 128 IPR019787 -
Pste3g02325 1382 SUPERFAMILY FYVE/PHD zinc finger 78 128 IPR011011 -
Pste3g02325 1382 FunFam chromodomain-helicase-DNA-binding protein 1-like isoform X1 988 1215 - -
Pste3g02325 1382 ProSitePatterns Zinc finger PHD-type signature. 84 125 IPR019786 -
Pste3g02325 1382 Gene3D - 745 987 IPR038718 -
Pste3g02325 1382 MobiDBLite consensus disorder prediction 296 372 - -
Pste3g02325 1382 CDD CD1_tandem 611 645 - -
Pste3g02325 1382 CDD CD2_tandem 660 713 - -
Pste3g02325 1382 SMART helicmild6 1099 1184 IPR001650 -
Pste3g02325 1382 SUPERFAMILY Chromo domain-like 607 650 IPR016197 -
Pste3g02325 1382 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 766 943 IPR014001 -
Pste3g02325 1382 MobiDBLite consensus disorder prediction 343 368 - -
Pste3g02325 1382 MobiDBLite consensus disorder prediction 201 250 - -
Pste3g02325 1382 CDD PHD2_CHD_II 84 125 - -
Pste3g02325 1382 PANTHER CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 3-RELATED-RELATED 111 1380 - -
Pste3g02325 1382 SMART chromo_7 578 649 IPR000953 -
Pste3g02325 1382 SMART chromo_7 659 716 IPR000953 -
Pste3g02325 1382 SUPERFAMILY Chromo domain-like 653 702 IPR016197 -
Pste3g02325 1382 MobiDBLite consensus disorder prediction 201 230 - -
Pste3g02325 1382 Pfam PHD-finger 84 125 IPR019787 -
Pste3g02325 1382 SMART ultradead3 750 954 IPR014001 -
Pste3g02325 1382 MobiDBLite consensus disorder prediction 1335 1382 - -
Pste3g02325 1382 MobiDBLite consensus disorder prediction 32 58 - -
Pste3g02325 1382 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 980 1239 IPR027417 -
Pste3g02325 1382 CDD SF2_C_SNF 1068 1195 - -
Pste3g02325 1382 MobiDBLite consensus disorder prediction 296 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02325 Pste-Chr3 16425524 16437619 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Pste3g02325 SNF2_N 5.5e-59 CL0023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02325 3 16425524 16437619 Pste3g02325 3 16425524 16437619 ECH