Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g02000 ATGCTCCAAAGAAACCTCTGCCACGTCACAAACACTCCGCTCCTCAATTCGTCATCAGCACAGTACCACTCCGCACGTGCCAGAAGACCACCCCACCCCACCCCACCCCTCTCTCTCACGTGCCCTGTTGAACTGATTTTCCTACTACGTCGTCACTCTTCACCAATAAATACAACACAACAACCTTCTCCTTGCTCGCCAAACCCTAACCTCCTTCCTTTCATCCTACACAAACCACTGTTCCCACCTCCTTTTTCTTACTGTTCTACTACCATGTTAGACACTGGTGAACGTGATTCCGAGGCCAGTTTGGACACCTCCATGAGCAGCGACAGCCTTTGCAGCACCAGTTTCGGCCGTCTCTCCTTCGATCTCCTCCCCCCCTCGCCGGACACTCTCTCCATCAAGCCTCACCGCTCCTCCGACTTCGCCTATTCCGCCATCCGCTCCGCCACCTTCCGTCGCAAGGCCGCCCTCACCTTCCGTGACTTCCACCTCCTCCGCCGCATCGGCGCCGGCGACATCGGCACCGTCTATCTCTGCCGCCTCCGTAACAACCACCAATTCCACAGCCGCGAAGAGGACGAAGAAGATGACGCGTCCTGTTTATACGCCATGAAGGTGGTGGACAAAGACGCAGTGGCATTGAAGAAGAAGTCCCAGCGAGCGGATATGGAGAGAAAAATCCTCAAGATGCTCGACCACCCGTTCCTCCCTACTCTCTACGCCGAGTTCGAAGCCTCTCATTTCTCTTGCATCGTCATGGAGTTTTGTTCCGGTGGAGACTTGCACACCCTGCGCTTCAGGCACCCTCACAATCGTTTCCCTCTCTCCTCCGCTAGATTTTATGCCGCGGAGGTGCTGGTGGCGTTGGAATACCTTCACATGCTGGGAATCATCTACAGAGATTTAAAGCCCGAAAACGTGTTGGTGAGATCAGACGGTCACATCATGCTTTCCGATTTCGATCTTTCTCTTTGCTCAGATGCAATCCCAGCCGTTGAAGCCTCAGATTCCTTACACGATCCACCTCAAACTTACACCAACACTTACACCCATTCCCGTTCACAGTCTTTCGCTAATCCGTTCTCCTGCTTCTCCAGCCGGTCTCGCGATGTACGGGCTATTGAACCCAACCGGCTCTTCGTTGCCGAACCGGTTTCGGCACGGTCCTGCTCTTTTGTTGGGACTCACGAGTACGTGTCCCCGGAGGTTGCTGCCGGCGGGTCCCACGGAAACGCCGTGGACTGGTGGTCCTTTGGAGTGTTTATCTACGAGCTCATATACGGTCGCACGCCCTATGCGGGTCCATCCAAGGAGGCTACGCTGCGTAACATAGTAAAGAAACCTCTGGTGTTTCCCACGGCCACCCCCTCCAGCAGTCTTGAACTCCACGCGCGGGATTTGATATCCGGCTTGCTGAACAAGGATCCCGCGCGTCGGCTCGGCTCCAAGCGCGGCGCCGCTGACGTCAAGAAACACCCTTTCTTCAAAGGGCTTAATTTGGCGCTGATTCGCATGCAGACGCCGCCCCAAATGCCTGGCTCGAGACGGACTAAAACGACGTCGCTGTATCCCGTGAAGGATAACAGCAATAACCATAATAAACAACAACAGACGGGGTCATTTGATTTTTACTTTTAA 1644 0.545 MLQRNLCHVTNTPLLNSSSAQYHSARARRPPHPTPPLSLTCPVELIFLLRRHSSPINTTQQPSPCSPNPNLLPFILHKPLFPPPFSYCSTTMLDTGERDSEASLDTSMSSDSLCSTSFGRLSFDLLPPSPDTLSIKPHRSSDFAYSAIRSATFRRKAALTFRDFHLLRRIGAGDIGTVYLCRLRNNHQFHSREEDEEDDASCLYAMKVVDKDAVALKKKSQRADMERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCSGGDLHTLRFRHPHNRFPLSSARFYAAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSDAIPAVEASDSLHDPPQTYTNTYTHSRSQSFANPFSCFSSRSRDVRAIEPNRLFVAEPVSARSCSFVGTHEYVSPEVAAGGSHGNAVDWWSFGVFIYELIYGRTPYAGPSKEATLRNIVKKPLVFPTATPSSSLELHARDLISGLLNKDPARRLGSKRGAADVKKHPFFKGLNLALIRMQTPPQMPGSRRTKTTSLYPVKDNSNNHNKQQQTGSFDFYF 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g02000 547 Gene3D Transferase(Phosphotransferase) domain 1 390 515 - -
Pste3g02000 547 Gene3D Phosphorylase Kinase; domain 1 162 257 - -
Pste3g02000 547 MobiDBLite consensus disorder prediction 510 547 - -
Pste3g02000 547 MobiDBLite consensus disorder prediction 512 547 - -
Pste3g02000 547 FunFam serine/threonine-protein kinase D6PK-like 389 515 - -
Pste3g02000 547 PANTHER FLIPPASE KINASE 1-RELATED 103 521 - -
Pste3g02000 547 SUPERFAMILY Protein kinase-like (PK-like) 145 519 IPR011009 -
Pste3g02000 547 ProSitePatterns Serine/Threonine protein kinases active-site signature. 299 311 IPR008271 GO:0004672|GO:0006468
Pste3g02000 547 FunFam protein kinase PINOID 2 162 257 - -
Pste3g02000 547 Gene3D Transferase(Phosphotransferase) domain 1 258 325 - -
Pste3g02000 547 FunFam protein kinase PINOID 258 326 - -
Pste3g02000 547 ProSiteProfiles Protein kinase domain profile. 164 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02000 547 SMART serkin_6 164 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02000 547 Pfam Protein kinase domain 391 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pste3g02000 547 Pfam Protein kinase domain 164 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g02000 Pste-Chr3 13671591 13673417 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g02000 97 546 AGC Kinase Gene Family AT2G34650 63.020 0.0 566
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pste3g02000 Pkinase 1.3e-30 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g02000 3 13671591 13673417 Pste3g02000 3 13671591 13673417 ECH