Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pste3g01974 AAAAATGCCATAAGCCTATCACTCATCACTTTCTATAGCCACAAAACCACTTCCTTACTCCATTATTTTCATCTTCTTATTTTTTTCCTTCTCTCACACTTCCACGCTTTCAATACCCAGCACCCTTTTGCATGTTCCACCTCAATTTCTCACCCAAAGAGTTTCTTCTGTCTTTGAACCGAGGTACCATACCCTTTTTGTTCTATAGGACCAGCAGTGTTGATATTACTCTTATTTTGTCACTTTTGATTGGAATTTTTGGTTTCTGGGTAGGTCGAGTTCTTAATTGGGGTGTGTGGTGTAATGGGGTATTTTTGAGGTTTTAGAAGATACTTAAATTTTGGAACTTTTTAGTGTTTTGGTGTTGTGGGGTGGGGCTCAAAATGTTAATTTTGGTGGGGAACGTGCAAGGAACAATGAGTTCTCTTGCTTCTCCAATGAGTCTGGGGAGTCTCATGGGTGTGAGTTCCTCTGGAAGGTCCCATTCTGTGGTGAGGAGAGTCTCTCTTTCAAGAGGGAACTGTAAGGGGAGAAAGAGATGCCATTGTTTGTCATTGTCTGTGTGTAGATATTCAGTGGCCACAACTGATTTTGTTGCTGACCAAGGGAATTCAGTGTCCCTTGATTCTAACAGTAGTAGCAGTAGTAAGGGTGGAGATGATGGTGCTGGTTTTGTGCTTAAGCCTCCTCCTAAGCCTGTGTTGAAGTCCCCAGAAAATAAGAATGATCTCATTGTGAGACCCTCAAGGACTACTCGGGACCTTAGGGCTGTGGAAGAGAGGAACAAGGTGATTGAGTCACTTGGGGAGGTGTTGGAGAAGGCGGAAAAGCTGGAGAGTTCTAAGGTGAATGGTGAAAGGAATAATGGTTCATTGAATAAACCAGTTAAGAATAATGCAGAAGCTAGTCCTAAGGCTGATAAACCAGTCAATTCAGCAACATCTCAGAAGTCTAAAACCTTGAAGAGTGTATGGCGAAAAGGGGACACAGTTGCGTCTGTGCAAAAGGTTGTGAAGGAAGTACCAAAGCCTAGTAATAACAAAAATGAAGGGGAGAAATCTCAAACAAGGGGAGGGGAGAAAGTCATTTCTCAAACTCGTGCCCCTCAACCGCCTTTAAAACCTCAACCAAAATTACAAATGAAACCTTCTATAGCTCCCCCACCTATAAAAAAACCTGTCGTCTTGAGGGATAAGGGAGCAGCTGAAACATCAGTTAAATCTAAAGAGAAGAAGTCGCCTATCTTGATTGATAAGTTTGCTTCCAAGAAACCAGTAGTTGATCCTCTAATTGCGCAAGCAGTTCTAGCTCCTCCGAAACCAGGGAAGGCACCTCCCCCAGGAAAGTTTAGAGATGATTTCCGGAAGAAAGGTGCTGCAGCTGGGGGACCAAGAAGACGAATGTTAGAGGATGATGATGATGTGATTCATGATGAGGAGGCATCAGAACTCAATGTCTCTATTCCTGGTGCTGCAACAGCTAGAAAAGGAAGGAAATGGAGTAAAGCAAGCCGAAAGGCAGCACGTCTCCAGGCTGCCAGGGATGCAGCTCCTGTCAAAGTAGAAATTCTAGAGGTTGGTGACAATGGTATGCTGGTGGAGGAATTAGCCTACTGTTTGGCAACCAGTGAAGGTGAAATCCTGGGTTATCTGTACGCCAAGGGGATTAAACCAGATGGGGTACAAACTCTTGATAAAGATATGGTAAAGATGATTTGTAAAGAGTATGATGTTGAAGTCATAGATGCTGATCCAGTCAAAGTTGAAGGTTTGGTGAAGAAAAGAGAAATTCTTGACGAAGATGACCTTGATAAACTCCAAGATAGACCTCCTGTCATTACTATCATGGGCCATGTAGATCACGGCAAGACAACTCTTTTGGATTATATACGGAAGAGCAAGGTAGCTGCTTCTGAAGCTGGTGGGATCACACAAGGAATTGGGGCTTATAAAGTGCAAGTACCTGTTGATGGCAAGAAGTTGCCCTGTGTTTTCCTTGACACTCCTGGACATGAGGCATTTGGAGCAATGAGAGCTCGTGGAGCAAGCATAACGGACATTGCTATTATTGTTGTGGCTGCTGATGATGGGATTCGTCCTCAAACAAATGAAGCTATAGCTCATGCTAAAGCAGCAGGAATAGATAAAGATGGAGCAAATCCAGAAAGAGTCATGCAAGAGCTTTCTTCAATTGGTTTAATGCCAGAAGACTGGGGTGGTGACATTCCAATGGTTCCGATAAGTGCTCTTAAAGGGAAGAATGTAGATGATCTTTTGGAGACAGTTATGCTTGTTGCTGAGTTGCAAGAACTGAAGGCTAATCCTGATAGAAATGCGAAAGGAACAGTCATTGAGGCAGGGCTAGATAAATCAAAGGGACCATTTGCATCATTTATCATACAGAATGGCACCCTTAAACGTGGCGATGTAGTAGCTTGTGGAGAAGCTTTTGGAAAGGTGCGTGCTTTATTTGATGATAGTGGAAAGCGTGTTGATGAAGCTACACCCTCTATACCTGTACAGGTTATTGGATTGAATAATGTTCCAATTGCTGGTGATGAATTTGAGGTTGTTGAATCCCTTGATACTGCACGTGAAAAGGCAGAGGCTCGTGCTGTGACATTGCGGAATGAGCGTATTTCAGCAAAGGCAGGAGATGGCAAGATTACCCTTTCTTCCTTAGCTTCAGCAGTTTCATCAGGAAAGCTATCTGGACTAGACTTGCATCAGCTTAATATTATTTTGAAGGTTGATCTTCAGGGATCTATTGAAGCTATCAGAAAAGCTCTGCAGGTGCTACCCCAAGACAATGTTACAATGAAGTTTTTATTGGAAGCGACGGGTGATGTAAGCACAAGTGATGTGGACCTTGCAGTTGCAAGCAAGGCCATCATTTTGGGATTTAATGTGAAAGCACCGGGCTCTGTGAAAAGCTATGCTGAGAACAAAGCTGTTGAGATTAGATTATATAGAGTTATTTATGAATTAATTGATGATGTACGAAATGCAATGGAAGGGCTCCTAGATCCTGTTGAGGAACAAGTATCAATTGGTTCTGCCGTAGTACGAGCCGTATTCAGCAGTGGCAGTGGTCGTGTAGCTGGATGCATGGTTACAGATGGAAAGGTACTTAAAGACTGTGGTATTCGAGTCAAGCGGAAGGGAAAAGTAATTCATGTTGGTATTCTTGATTCTTTGAGACGGGTGAAGGAGATTGTTAAAGAGGTAAGTGCTGGTCTTGAGTGTGGACTTGGGTTAGATGACTTTGATGATTGGGAAGAAGGTGACATTATTGAAGCCTTTAACACTGTTCAGAAGAAGAGAACCCTTGAAGAGGCCTCAGCATCAATGGCAGCTGCAGTGGAGGGAGTAGGAGTTGCATTGTAGAATGAACAATGATGTGCCGCCATGAGATTGGCTCCTATCTATTGTTTGACACAGTGCAAATGCATCCCAGGTTCCAGTTGAAAAAACAATGTATTTCTCTCCAAATTGATGTTATGAAGTTGGAGAGAGGTAACAATTCCCTCATTATATATTGACATTGAGGGTGCCACTGCTGAGGATCTGTGTTCAAAATGATTTGTTCCATTGTTAGCTGTAAAAGTGTATATAACAAAATATCAGTTTCAGCTCCTTCTAGAGAGGAAAAAAGTTTCAATGCCTTGACCCAAAAATACTTGTAACAATCACATTTAAGACAAGGGAACAATTGCATTTTTTTTCTTCATTTTTTGTATGATGCTCTATAATGGATGCATCATCTTATTTTTGATAAAAGGAGAAAAAATGGATGCATCATCCTGCACTGAGGTCTGGAAATTTGTATTTCTACCGTGTTTTGCTCCTAGATGAAATATAGTTGGATGACCCAATTTACACCGATGTAAATACTTCTGTTAAAATATTTTGCAGTTTGTTTTATCCCCTAATAATGATTGGAT 3943 0.4195 MLILVGNVQGTMSSLASPMSLGSLMGVSSSGRSHSVVRRVSLSRGNCKGRKRCHCLSLSVCRYSVATTDFVADQGNSVSLDSNSSSSSKGGDDGAGFVLKPPPKPVLKSPENKNDLIVRPSRTTRDLRAVEERNKVIESLGEVLEKAEKLESSKVNGERNNGSLNKPVKNNAEASPKADKPVNSATSQKSKTLKSVWRKGDTVASVQKVVKEVPKPSNNKNEGEKSQTRGGEKVISQTRAPQPPLKPQPKLQMKPSIAPPPIKKPVVLRDKGAAETSVKSKEKKSPILIDKFASKKPVVDPLIAQAVLAPPKPGKAPPPGKFRDDFRKKGAAAGGPRRRMLEDDDDVIHDEEASELNVSIPGAATARKGRKWSKASRKAARLQAARDAAPVKVEILEVGDNGMLVEELAYCLATSEGEILGYLYAKGIKPDGVQTLDKDMVKMICKEYDVEVIDADPVKVEGLVKKREILDEDDLDKLQDRPPVITIMGHVDHGKTTLLDYIRKSKVAASEAGGITQGIGAYKVQVPVDGKKLPCVFLDTPGHEAFGAMRARGASITDIAIIVVAADDGIRPQTNEAIAHAKAAGIDKDGANPERVMQELSSIGLMPEDWGGDIPMVPISALKGKNVDDLLETVMLVAELQELKANPDRNAKGTVIEAGLDKSKGPFASFIIQNGTLKRGDVVACGEAFGKVRALFDDSGKRVDEATPSIPVQVIGLNNVPIAGDEFEVVESLDTAREKAEARAVTLRNERISAKAGDGKITLSSLASAVSSGKLSGLDLHQLNIILKVDLQGSIEAIRKALQVLPQDNVTMKFLLEATGDVSTSDVDLAVASKAIILGFNVKAPGSVKSYAENKAVEIRLYRVIYELIDDVRNAMEGLLDPVEEQVSIGSAVVRAVFSSGSGRVAGCMVTDGKVLKDCGIRVKRKGKVIHVGILDSLRRVKEIVKEVSAGLECGLGLDDFDDWEEGDIIEAFNTVQKKRTLEEASASMAAAVEGVGVAL 1000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pste3g01974 1000 CDD IF2_eIF5B 483 640 - -
Pste3g01974 1000 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 778 890 IPR036925 -
Pste3g01974 1000 FunFam Translation initiation factor IF-2 779 884 - -
Pste3g01974 1000 MobiDBLite consensus disorder prediction 309 338 - -
Pste3g01974 1000 CDD mtIF2_IVc 890 972 - -
Pste3g01974 1000 FunFam Translation initiation factor IF-2 647 765 - -
Pste3g01974 1000 SUPERFAMILY Translation proteins 647 731 IPR009000 -
Pste3g01974 1000 MobiDBLite consensus disorder prediction 268 284 - -
Pste3g01974 1000 NCBIfam small GTP-binding protein domain 482 634 IPR005225 GO:0005525
Pste3g01974 1000 MobiDBLite consensus disorder prediction 242 262 - -
Pste3g01974 1000 CDD IF2_mtIF2_II 651 744 IPR044145 -
Pste3g01974 1000 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 480 644 IPR000795 GO:0003924|GO:0005525
Pste3g01974 1000 FunFam Translation initiation factor IF-2 477 646 - -
Pste3g01974 1000 Gene3D - 477 646 IPR027417 -
Pste3g01974 1000 NCBIfam translation initiation factor IF-2 402 982 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Pste3g01974 1000 MobiDBLite consensus disorder prediction 220 235 - -
Pste3g01974 1000 FunFam Translation initiation factor IF-2 884 981 - -
Pste3g01974 1000 Hamap Translation initiation factor IF-2 [infB]. 7 980 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Pste3g01974 1000 Pfam Elongation factor Tu GTP binding domain 485 636 IPR000795 GO:0003924|GO:0005525
Pste3g01974 1000 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 474 647 IPR027417 -
Pste3g01974 1000 MobiDBLite consensus disorder prediction 318 338 - -
Pste3g01974 1000 PRINTS GTP-binding elongation factor signature 552 563 IPR000795 GO:0003924|GO:0005525
Pste3g01974 1000 PRINTS GTP-binding elongation factor signature 536 546 IPR000795 GO:0003924|GO:0005525
Pste3g01974 1000 PRINTS GTP-binding elongation factor signature 484 497 IPR000795 GO:0003924|GO:0005525
Pste3g01974 1000 MobiDBLite consensus disorder prediction 156 170 - -
Pste3g01974 1000 SUPERFAMILY Translation proteins 886 980 IPR009000 -
Pste3g01974 1000 MobiDBLite consensus disorder prediction 75 91 - -
Pste3g01974 1000 Pfam Translation-initiation factor 2 779 872 IPR023115 -
Pste3g01974 1000 Gene3D Translation factors 647 762 - -
Pste3g01974 1000 Gene3D Translation factors 884 981 - -
Pste3g01974 1000 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 163 988 IPR015760 -
Pste3g01974 1000 MobiDBLite consensus disorder prediction 150 284 - -
Pste3g01974 1000 MobiDBLite consensus disorder prediction 75 120 - -
Pste3g01974 1000 Coils Coil 730 750 - -
Pste3g01974 1000 ProSitePatterns Initiation factor 2 signature. 933 955 IPR000178 GO:0003743|GO:0003924|GO:0005525|GO:0006413
Pste3g01974 1000 Gene3D - 779 883 IPR036925 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pste3g01974 Pste-Chr3 13436392 13446053 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pste3g01974 459 870 Eukaryotic Initiation Factors Gene Family AT1G76810 28.243 2.51e-24 108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pste3g01974 3 13436392 13446053 Pste3g01974 3 13436392 13446053 ECH