LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pste3g01753	AAAACAAAACGTCAAAACCACTACAATTTTCTGCTAACACCACCGCTAATGGCAGCACTGAACCTTAGACGCATGGCACTACTATCCTCGAAGCTTATGTCTCGCCCTTACCATCTTCTCTCTGTTCAGATCCAGATGATGCAACCCTCTTCTCCTCCCCTCTCTCGCAAGATGAGCATGGATGCACAGAGTGTTGCTTCCCAGCTTAATAGTTCTGGATTGCTGAGGACTCAGGGTCTTATTGGGGGGAAATGGAGTGATGCATATGATGGAAAAACCATAAAGGTTTATAATCCAGCAACTGGTGAATCTATTGTAGATGTTGCATGCATGGGTGGAAGAGAAACCAATGATGCAATTTCTGCAGCCTATGGTGCATATGGATCATGGAGCAAAACCACTGCTGCTGAACGAAGCAAATTGCTGAGGAAATGGTATGATTTGTTAATGGCACATAAAGAAGAACTTGCACAACTTATTACCTTGGAGCAGGGGAAACCTCTTAAAGAGTCTTTGGGTGAGATAAACTATGGGGCTGGCTTTATTGAGTTTTCAGCTGAGGAGGCAAAGCGTATATATGGCGATATAATTCCTGCACCTTTATCTGATCGGCGTTTATTTGTTCTAAAGCAGCCTGTAGGGGTTGTAGGTGCAATTACACCGTGGAACTTTCCCCTTGCTATGATTACTCGAAAGGTTGGTCCAGCCCTTGCATGTGGCTGTACAGTGGTCATAAAGCCCTCTGAGCTTACACCTCTCACTGCTTTAGCTGCAGCAGAACTCTCTATTCAAGCTGGAATACCAGCGGGTGTCGTGAATGTGGTAATGGGAAATGCTCCTGATATTGGGGACGCTTTAATTGCAAGTCGACAGGTAAGGAAGATCACATTCACAGGCTCAACAGCTGTTGGAAAGAAATTGATGGCTGGATCAGCTGAGACGGTTAAAAAAGTATCTCTGGAACTTGGTGGCAATGCACCTTGCATAGTTTTTGATGATGCTGATCTGGATGTTGCAGTAAAAGGAACTCTTGCAGCAAAGTTCCGCAACAGTGGACAAACATGTGTTTGTGCAAATAGAATTATTGTGCAAGAAGGTATATATGAGAAATTTGCAAATGATTTGCGTGAAGCTGTTCAGAGTATGAAAGTTGGGGATGGTTTTAGTGAAGGTGTAGCTCAGGGCCCTCTAATCAATGAAGCTGCTGTCCAAAAGGTTGAGTCCTTAATTCATGATGCTACATCAAAGGGAGCAAAAGTAATTCTTGGAGGTAAAAGGCATAGCCTTGGATATACTTTTTATGAACCCACAGTCATCAGTGACGTAGACAACGATATGCGCATATCAAGAGAGGAAGCATTTGGACCTGTTGCTCCCCTTTTGAGATTCAAAACTGAAGAGGAGGCTATTAGAATTGCTAATGACACTAATGCAGGTTTGGGTTCATACATATTTACAAACAGTATCCAACGATCCTGGCGAGTTGCTGAGGCACTTGAATATGGACTTGTGGGTGTTAATGAAGGAGTAATTTCAACTGAGGTGGCTCCATTTGGTGGTTATAAACAGTCTGGACTCGGAAGAGAAGGCTCCAAATATGGGATGGATGAATATTTAGAGATCAAATATGTGTGTTTGGGAAACATGAACAAAGCATGAAGAGCTATACATGAGGCCATGCCAAGCTAAAGAGGGAGGAGTTAACTTGTGTCTGTTTGTTGAAGAATAAGTTTGTTGAAGAATATGCATATAGCTGCACACCAAATAAGTGCAGACCTGCAAAGAAACTCCTCATTTTTCTTTGTTTTATTTCTTCTTTCCTTTCTTTTTAAGGTCTTTTAGAATATTGAAAAAGGCACTATAGATGGTACGAGGTTAACAAAATCAATGAAAATGGCTTTTGATCCTTTTGGCCGTGGAGTGGTGTTTCATTGGGTTTTTACCAAATCAATGAATTTGGTGGATGTTTGGATTCATGTTAGATTATCTAAAATTATGTTAGAATACCGGCTAATGTGATTTTAGATAGATGTATACATGCTTGGTCTTACATTGAAGAA	2060	0.4146	MAALNLRRMALLSSKLMSRPYHLLSVQIQMMQPSSPPLSRKMSMDAQSVASQLNSSGLLRTQGLIGGKWSDAYDGKTIKVYNPATGESIVDVACMGGRETNDAISAAYGAYGSWSKTTAAERSKLLRKWYDLLMAHKEELAQLITLEQGKPLKESLGEINYGAGFIEFSAEEAKRIYGDIIPAPLSDRRLFVLKQPVGVVGAITPWNFPLAMITRKVGPALACGCTVVIKPSELTPLTALAAAELSIQAGIPAGVVNVVMGNAPDIGDALIASRQVRKITFTGSTAVGKKLMAGSAETVKKVSLELGGNAPCIVFDDADLDVAVKGTLAAKFRNSGQTCVCANRIIVQEGIYEKFANDLREAVQSMKVGDGFSEGVAQGPLINEAAVQKVESLIHDATSKGAKVILGGKRHSLGYTFYEPTVISDVDNDMRISREEAFGPVAPLLRFKTEEEAIRIANDTNAGLGSYIFTNSIQRSWRVAEALEYGLVGVNEGVISTEVAPFGGYKQSGLGREGSKYGMDEYLEIKYVCLGNMNKA	536

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pste3g01753	536	NCBIfam	succinate-semialdehyde dehydrogenase	80	526	IPR010102	GO:0009013\|GO:0009450
	Pste3g01753	536	ProSitePatterns	Aldehyde dehydrogenases glutamic acid active site.	304	311	IPR029510	GO:0016491
	Pste3g01753	536	Gene3D	Aldehyde Dehydrogenase; Chain A, domain 2	308	497	IPR016163	GO:0016620
	Pste3g01753	536	FunFam	Aldehyde dehydrogenase, putative	500	526	-	-
	Pste3g01753	536	SUPERFAMILY	ALDH-like	57	533	IPR016161	GO:0016491
	Pste3g01753	536	Pfam	Aldehyde dehydrogenase family	71	528	IPR015590	GO:0016491
	Pste3g01753	536	FunFam	Succinate-semialdehyde dehydrogenase I	308	497	-	-
	Pste3g01753	536	PANTHER	SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL	54	533	-	-
	Pste3g01753	536	FunFam	Succinate-semialdehyde dehydrogenase I	75	320	-	-
	Pste3g01753	536	ProSitePatterns	Aldehyde dehydrogenases cysteine active site.	332	343	IPR016160	GO:0016491
	Pste3g01753	536	Gene3D	Aldehyde Dehydrogenase; Chain A, domain 1	75	522	IPR016162	GO:0016491
	Pste3g01753	536	CDD	ALDH_F5_SSADH_GabD	80	530	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pste3g01753	Pste-Chr3	11324713	11337207	Dispersed/Transposed

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pste3g01753	3	11324713	11337207	Pste3g01753	3	11324713	11337207	ECH